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The map label for this gene is rbn [C]

Identifier: 189352680

GI number: 189352680

Start: 774655

End: 775632

Strand: Reverse

Name: rbn [C]

Synonym: BMULJ_03911

Alternate gene names: 189352680

Gene position: 775632-774655 (Counterclockwise)

Preceding gene: 189352688

Following gene: 189352679

Centisome position: 31.36

GC content: 69.73

Gene sequence:

>978_bases
ATGAAACGACCGATCACTTCCGAGGCCACGCGGCTCGCGCAGCGTCAGGCGAACTGGGCACTGACCGCGTTCAAGCGTTT
TTCGTCCGACCGCTGCTCGTCGATGGCGGCCGGCATCGCGTTCTTCTCCGCGTTCTCGCTCGCGCCGACGCTCGTGATGG
TGATTGCGGTGGCTGGCTGGTTCTACGGCGACGAGGCCGCGCGCGGCCAGGTGTTCGAGCAGGCGCATCAGCTGATCGGC
GACGACGCGGCGGCCAGCATCCAGACCATCGTGCAGAACGCGCATCGCGCCGGCGAGCGCGGCGGCATCGCGACGCTGAT
CTCGTTCGCGGCGCTCGCGATCGGTGCGTCGGCGACGTTCGCGTCGCTGAACACGGCGCTGAACGTGATCTGGCCGGCGA
CCGAAAGCCGCTGGTCGAGCGTGCTCGGGCTCGTACGCGTGCGGCTCGTGTCGTTCGGGCTCGTGCTCGGCGTCGCGTTC
CTGCTGATCGTGTCGCTCGTGCTCGACACGGCGATCACGTTCATCGGCACCTGGCTGCTCGGCGATTCGCCTTACGTCGT
AGTCACGAACGTGCTGCAGCTCGTCGTCGGTGTCGCGGTGCTCGCGGGCGCGTTCTCGGCGCTGTTGAAATTCCTGCCCG
ACGCGCGCGTCGCGTGGCGTGACGCCGCGGTCGGCGGAATCGTGTCGGCGATCCTGTTCTCCGGCGGCAAGAAGCTGTTC
GCGCTCTACCTCGCGCGCGCGGGCACTGCGAGTGCGTTCGGTGCGGCGGGCTCGTTCGCGGTGCTGCTGATGTGGCTGTA
CTTCTCGGCGCTCGTGCTGCTGCTCGGCGCGGAATTCTCGGCCGCGCGCGGCGAGGCATATCGGCGCACGGATGCGGCGG
CGCGCGATGCGGCGGCGCCCGATGCAACTGCGCGCGATGCGACGGCGCACGATTCGCGAGCCGCCCGCCCGCCGGGCGAG
CGCACGCGCGACGATTGA

Upstream 100 bases:

>100_bases
CAAACTTCGCAACTATGTACGGCTCTTCGGATCAATACTTGAATCCCGATCAATGCGATTCCGACGCACCGGCGCGCCGC
CGGACGTCGCCACGACCATC

Downstream 100 bases:

>100_bases
CCGACGCTCCGGCGTAGCGGCCGGCACGCGATTACGCCGGCAACGCGCGGTCGTGCAAGCGGTCGCGCTTCTCACGCCGA
ACTTCCCTTTTTCGCGATGC

Product: BN-like family ribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKRPITSEATRLAQRQANWALTAFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIG
DDAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVLGLVRVRLVSFGLVLGVAF
LLIVSLVLDTAITFIGTWLLGDSPYVVVTNVLQLVVGVAVLAGAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLF
ALYLARAGTASAFGAAGSFAVLLMWLYFSALVLLLGAEFSAARGEAYRRTDAAARDAAAPDATARDATAHDSRAARPPGE
RTRDD

Sequences:

>Translated_325_residues
MKRPITSEATRLAQRQANWALTAFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIG
DDAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVLGLVRVRLVSFGLVLGVAF
LLIVSLVLDTAITFIGTWLLGDSPYVVVTNVLQLVVGVAVLAGAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLF
ALYLARAGTASAFGAAGSFAVLLMWLYFSALVLLLGAEFSAARGEAYRRTDAAARDAAAPDATARDATAHDSRAARPPGE
RTRDD
>Mature_325_residues
MKRPITSEATRLAQRQANWALTAFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIG
DDAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVLGLVRVRLVSFGLVLGVAF
LLIVSLVLDTAITFIGTWLLGDSPYVVVTNVLQLVVGVAVLAGAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLF
ALYLARAGTASAFGAAGSFAVLLMWLYFSALVLLLGAEFSAARGEAYRRTDAAARDAAAPDATARDATAHDSRAARPPGE
RTRDD

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=301, Percent_Identity=27.5747508305648, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 34147; Mature: 34147

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPITSEATRLAQRQANWALTAFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYGDEAARGQVFEQAHQLIGDDAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATF
HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH
ASLNTALNVIWPATESRWSSVLGLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFIGTWLL
HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDSPYVVVTNVLQLVVGVAVLAGAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
ALYLARAGTASAFGAAGSFAVLLMWLYFSALVLLLGAEFSAARGEAYRRTDAAARDAAAP
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCC
DATARDATAHDSRAARPPGERTRDD
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRPITSEATRLAQRQANWALTAFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYGDEAARGQVFEQAHQLIGDDAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATF
HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH
ASLNTALNVIWPATESRWSSVLGLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFIGTWLL
HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDSPYVVVTNVLQLVVGVAVLAGAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
ALYLARAGTASAFGAAGSFAVLLMWLYFSALVLLLGAEFSAARGEAYRRTDAAARDAAAP
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCC
DATARDATAHDSRAARPPGERTRDD
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA