Click here to switch to the map view.

The map label for this gene is glpC [H]

Identifier: 189352372

GI number: 189352372

Start: 425009

End: 426346

Strand: Direct

Name: glpC [H]

Synonym: BMULJ_03591

Alternate gene names: 189352372

Gene position: 425009-426346 (Clockwise)

Preceding gene: 189352371

Following gene: 189352373

Centisome position: 17.18

GC content: 68.68

Gene sequence:

>1338_bases
ATGCCTCACAAGGAAGGCAGTCTCGAAGCGCCGACGCGGCATCCGCTCGACTGGCAGTCCGACGCGTTCTACGACCAGGC
CGCCATCGATGCGGAGATGACGCGCGTGTTCGACATCTGCGCCGGATGCCGTCGCTGCGTGTCGCTGTGCGGCGCATTTC
CATCGCTGTTCGACCTCGTCGACGACACGCCGTCCGGCGACATCGAGGAAGTGCCGAAGCAGGCGTTCGGCAACGTCGTC
GATCAGTGCTATCTGTGCGATCTCTGCTACATGACGAAGTGTCCGTACGTGCCGCCGCACGCATGGGACGTCGACTTTCC
GCATCTGATGCTGCGCGCGAAGGCCGCACGCTACAAGCGCGGCGAGGTCGCGCTGCGCGACAAGGTGCTGTCGAACACTG
ACGCGCTCGGCCATCTCGCCGGCATCCCGGTCGTCACGCAGACGGTGAACGCGGTGAACCGCACGCCGCCCGCGCGCCAT
GCGCTCGAGGCGGTGCTCGGCGTCGACCGCCGCGCCTGGCTGCCCGAGTTCGCGCCGCGCACGTTCCGGCGCAGCGCCGC
GCGCTCGTCCGCACCGCCGGTGCGCGACGGCGAACGCACGCCGGGCAAGGTCGCCGTCTACGCGACCTGCTACGTGAACT
TCAACGAACCGGGCATCGGCCACGACCTGCTCGCGATCCTCGCGCACAACGACATCCCGTACGAACTCGTGACGCGCGAA
GCGTGCTGCGGCATGCCGATGCTCGAACAGGGCAATCTCGCTGGCGTCGCCGCGAAGAAGGCGGCGAACGTGCCGGTACT
CGAACGCTACGCGCGCGACGGCTACGCGCTGCTCGGCGCGATTCCGAGCTGCGTGCTGATGTACAAGAGCGAGCTGCCGC
TGATGTTTCCGGACGACGCGGCAGTGCGCGCCGTCGCCGACGCGTTCTGGGATCCGTTCGAATACCTGATCGCGCGGCAT
CGCGACGGTCTGCTGAAGACCGATTTCACGCAGGCGCTCGGCACCGTGTCGTATCACGTGCCGTGCCACGCGCGCGTGCA
GAACATCGGGCGCAAGACGGCCGACGCGCTGTCGCTCGTGCCCGATACGCGCGTGAAGGTGGTCGAGCGCTGCTCGGGGC
ACGCGGGCACGTTCGGCGTGAAGAAGGCGTTCCACGCGGACGCGATGCGGATCGGCGGCCCGGTGTTCGCGGCGATGGCC
GAACCGCAGCCCGACGTGATCGCGTCCGACTGCGCGCTGGCCGGCCATCACATCGCGCAGGGCATCGACGAAAAGGGGCT
GCCGGCGGCGCCGCTCGCGCATCCGCTGACGCTGCTGCGGCGCGCATACGGCATCTGA

Upstream 100 bases:

>100_bases
TCGTCGACTGAAGCGGCCGCTCGCGCGCCACCGTTCGTCCGTCGCTGCCCGCCCCGCGCGGGCCGCGCTGGCGCGCCTGC
GCGCGCCGCTGGAGCATCCC

Downstream 100 bases:

>100_bases
CCGACGACTAACGAGGACATGGCGATGACGCTGACCCGCGATTCTCTGCTGACGCTCGAAGCCTACGCGAAGATCCGCAA
GGCCGAACACGCACGGCTCG

Product: glycerol-3-phosphate dehydrogenase subunit C

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MPHKEGSLEAPTRHPLDWQSDAFYDQAAIDAEMTRVFDICAGCRRCVSLCGAFPSLFDLVDDTPSGDIEEVPKQAFGNVV
DQCYLCDLCYMTKCPYVPPHAWDVDFPHLMLRAKAARYKRGEVALRDKVLSNTDALGHLAGIPVVTQTVNAVNRTPPARH
ALEAVLGVDRRAWLPEFAPRTFRRSAARSSAPPVRDGERTPGKVAVYATCYVNFNEPGIGHDLLAILAHNDIPYELVTRE
ACCGMPMLEQGNLAGVAAKKAANVPVLERYARDGYALLGAIPSCVLMYKSELPLMFPDDAAVRAVADAFWDPFEYLIARH
RDGLLKTDFTQALGTVSYHVPCHARVQNIGRKTADALSLVPDTRVKVVERCSGHAGTFGVKKAFHADAMRIGGPVFAAMA
EPQPDVIASDCALAGHHIAQGIDEKGLPAAPLAHPLTLLRRAYGI

Sequences:

>Translated_445_residues
MPHKEGSLEAPTRHPLDWQSDAFYDQAAIDAEMTRVFDICAGCRRCVSLCGAFPSLFDLVDDTPSGDIEEVPKQAFGNVV
DQCYLCDLCYMTKCPYVPPHAWDVDFPHLMLRAKAARYKRGEVALRDKVLSNTDALGHLAGIPVVTQTVNAVNRTPPARH
ALEAVLGVDRRAWLPEFAPRTFRRSAARSSAPPVRDGERTPGKVAVYATCYVNFNEPGIGHDLLAILAHNDIPYELVTRE
ACCGMPMLEQGNLAGVAAKKAANVPVLERYARDGYALLGAIPSCVLMYKSELPLMFPDDAAVRAVADAFWDPFEYLIARH
RDGLLKTDFTQALGTVSYHVPCHARVQNIGRKTADALSLVPDTRVKVVERCSGHAGTFGVKKAFHADAMRIGGPVFAAMA
EPQPDVIASDCALAGHHIAQGIDEKGLPAAPLAHPLTLLRRAYGI
>Mature_444_residues
PHKEGSLEAPTRHPLDWQSDAFYDQAAIDAEMTRVFDICAGCRRCVSLCGAFPSLFDLVDDTPSGDIEEVPKQAFGNVVD
QCYLCDLCYMTKCPYVPPHAWDVDFPHLMLRAKAARYKRGEVALRDKVLSNTDALGHLAGIPVVTQTVNAVNRTPPARHA
LEAVLGVDRRAWLPEFAPRTFRRSAARSSAPPVRDGERTPGKVAVYATCYVNFNEPGIGHDLLAILAHNDIPYELVTREA
CCGMPMLEQGNLAGVAAKKAANVPVLERYARDGYALLGAIPSCVLMYKSELPLMFPDDAAVRAVADAFWDPFEYLIARHR
DGLLKTDFTQALGTVSYHVPCHARVQNIGRKTADALSLVPDTRVKVVERCSGHAGTFGVKKAFHADAMRIGGPVFAAMAE
PQPDVIASDCALAGHHIAQGIDEKGLPAAPLAHPLTLLRRAYGI

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=415, Percent_Identity=26.5060240963855, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 48446; Mature: 48315

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHKEGSLEAPTRHPLDWQSDAFYDQAAIDAEMTRVFDICAGCRRCVSLCGAFPSLFDLV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DDTPSGDIEEVPKQAFGNVVDQCYLCDLCYMTKCPYVPPHAWDVDFPHLMLRAKAARYKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
GEVALRDKVLSNTDALGHLAGIPVVTQTVNAVNRTPPARHALEAVLGVDRRAWLPEFAPR
CCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHH
TFRRSAARSSAPPVRDGERTPGKVAVYATCYVNFNEPGIGHDLLAILAHNDIPYELVTRE
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHH
ACCGMPMLEQGNLAGVAAKKAANVPVLERYARDGYALLGAIPSCVLMYKSELPLMFPDDA
HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCHH
AVRAVADAFWDPFEYLIARHRDGLLKTDFTQALGTVSYHVPCHARVQNIGRKTADALSLV
HHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCC
PDTRVKVVERCSGHAGTFGVKKAFHADAMRIGGPVFAAMAEPQPDVIASDCALAGHHIAQ
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHH
GIDEKGLPAAPLAHPLTLLRRAYGI
CCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PHKEGSLEAPTRHPLDWQSDAFYDQAAIDAEMTRVFDICAGCRRCVSLCGAFPSLFDLV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DDTPSGDIEEVPKQAFGNVVDQCYLCDLCYMTKCPYVPPHAWDVDFPHLMLRAKAARYKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
GEVALRDKVLSNTDALGHLAGIPVVTQTVNAVNRTPPARHALEAVLGVDRRAWLPEFAPR
CCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHH
TFRRSAARSSAPPVRDGERTPGKVAVYATCYVNFNEPGIGHDLLAILAHNDIPYELVTRE
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHH
ACCGMPMLEQGNLAGVAAKKAANVPVLERYARDGYALLGAIPSCVLMYKSELPLMFPDDA
HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCHH
AVRAVADAFWDPFEYLIARHRDGLLKTDFTQALGTVSYHVPCHARVQNIGRKTADALSLV
HHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCC
PDTRVKVVERCSGHAGTFGVKKAFHADAMRIGGPVFAAMAEPQPDVIASDCALAGHHIAQ
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHH
GIDEKGLPAAPLAHPLTLLRRAYGI
CCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]