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The map label for this gene is 189352370

Identifier: 189352370

GI number: 189352370

Start: 423041

End: 424309

Strand: Direct

Name: 189352370

Synonym: BMULJ_03589

Alternate gene names: NA

Gene position: 423041-424309 (Clockwise)

Preceding gene: 189352369

Following gene: 189352371

Centisome position: 17.11

GC content: 73.21

Gene sequence:

>1269_bases
GTGACGCATGACGCGACGCATCGTGCCATCGAAGCCGTGTGGCGCATCGAGGCGCCGAAGATCATCGCGCGGGCGGCGCG
CGTGGTGCGTGACGTCGGCGTGGCCGAGGAGCTTGCGCAGGACACGCTCGTCGCCGCGCTCGAGCACTGGCCGGTCGACG
GCGTGCCCGACAATCCGGCCGCGTGGCTGATGACGGCCGTGAAGCGGCGCGCGCTCGATCGGGTCCGGCAGGAAGCGCTG
CATGCGACGAAGCGCAGCCAGCTCGGCCACGAGCTCGACGCGCTCGAAGCGCACGTGGTGCCCGACATCGCCGATGCGCT
CGCCGACGCGCGCGACGACGACATCGGCGACGATCTGCTGCGACTGATCTTCACGTCGTGCCATCCGGTGCTGTCGACCG
ATGCGCGCGTCGCGCTGACGCTGCGCTTGCTCGGCGGCCTGACGACGGGCGAGATCGCGCGCGCCTTCCTGACGCCGGAG
CCGACCATCGCACAGCGCATCGTGCGGGCGAAGCGCACGCTCGCGGCCGCGCGCGTGCCGTTCGAGGTGCCGGCCGCCGA
CGCGCGGCCCGCGCGGCTCGCGTCGGTGCTCGAGGTGATCTATCTGATCTTCAACGAAGGCTATGCGGCGACGGCCGGCG
ACGACTGGATGCGCCCGGCGCTCTGCGACGAGGCGCTGCGGCTCGGCCGCGTGCTGGCCGGGCTCGCGCCGAACGAAAGC
GAAGCGCTCGGCCTCGTCGCGCTGATGGAGCTGCAGGCGTCGCGGATGCACGCGCGCACCGATGCGCAGGGCAGGCCCGT
GCTGCTGCTCGATCAGGATCGCAGCCGCTGGGATCCGCTCTTGATCCGCCGCGGGCTCGCGGCGCTCGAGCGCGCGACGA
AGCTCGGCGGCGTGCGCGGGCCTTACGCGCTGCAGGCGGCGCTCGCCGCGTGCCACGCGCGCGCACGCCGTGCGGCCGAC
ACCGACTGGGCGCAGATCGTCGCGCTGTACGACGCGCTCGTCGAAGTCGCACCGTCGCCCGTCGTCGAATTGAATCGGGC
GGTCGCGGTCGGCATGGCGTTCGGGCCGGCCGCCGCGCTCGAACTCGTCGACGCGCTGCGCGACGATCCGGCGCTCGCGC
GCTATCACTGGCTGCCGAGCGTGCGCGGCGACCTGCTCGCGAAGCTCGGCCGCGCCGACGAAGCGAAGGCCGAGTTTCGC
CGCGCGGCGGCGCTCACGCGCAACGAACGCGAAAGGGAGCTGCTGCTCAAGCGCGCGACCGACGCGTGA

Upstream 100 bases:

>100_bases
AGTATCCGGGCATGTATGGCCATGCGTTCACCGATCCGGACGGCCATGCGTGGGGGCTGATCCATGTCGAACCGGGCGCG
CATGCCGCGGCGGAGGCATC

Downstream 100 bases:

>100_bases
TTCAGCCCGCGCGCCTTCGCCCGCCGCCCGCGCGCTATCGTCCGGATTGAAAAAGCCTATTGGGGGAAGCGCGCGCGAGC
ACCTAGATTAAAGAGCACGA

Product: ECF subfamily RNA polymerase sigma-70 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MTHDATHRAIEAVWRIEAPKIIARAARVVRDVGVAEELAQDTLVAALEHWPVDGVPDNPAAWLMTAVKRRALDRVRQEAL
HATKRSQLGHELDALEAHVVPDIADALADARDDDIGDDLLRLIFTSCHPVLSTDARVALTLRLLGGLTTGEIARAFLTPE
PTIAQRIVRAKRTLAAARVPFEVPAADARPARLASVLEVIYLIFNEGYAATAGDDWMRPALCDEALRLGRVLAGLAPNES
EALGLVALMELQASRMHARTDAQGRPVLLLDQDRSRWDPLLIRRGLAALERATKLGGVRGPYALQAALAACHARARRAAD
TDWAQIVALYDALVEVAPSPVVELNRAVAVGMAFGPAAALELVDALRDDPALARYHWLPSVRGDLLAKLGRADEAKAEFR
RAAALTRNERERELLLKRATDA

Sequences:

>Translated_422_residues
MTHDATHRAIEAVWRIEAPKIIARAARVVRDVGVAEELAQDTLVAALEHWPVDGVPDNPAAWLMTAVKRRALDRVRQEAL
HATKRSQLGHELDALEAHVVPDIADALADARDDDIGDDLLRLIFTSCHPVLSTDARVALTLRLLGGLTTGEIARAFLTPE
PTIAQRIVRAKRTLAAARVPFEVPAADARPARLASVLEVIYLIFNEGYAATAGDDWMRPALCDEALRLGRVLAGLAPNES
EALGLVALMELQASRMHARTDAQGRPVLLLDQDRSRWDPLLIRRGLAALERATKLGGVRGPYALQAALAACHARARRAAD
TDWAQIVALYDALVEVAPSPVVELNRAVAVGMAFGPAAALELVDALRDDPALARYHWLPSVRGDLLAKLGRADEAKAEFR
RAAALTRNERERELLLKRATDA
>Mature_421_residues
THDATHRAIEAVWRIEAPKIIARAARVVRDVGVAEELAQDTLVAALEHWPVDGVPDNPAAWLMTAVKRRALDRVRQEALH
ATKRSQLGHELDALEAHVVPDIADALADARDDDIGDDLLRLIFTSCHPVLSTDARVALTLRLLGGLTTGEIARAFLTPEP
TIAQRIVRAKRTLAAARVPFEVPAADARPARLASVLEVIYLIFNEGYAATAGDDWMRPALCDEALRLGRVLAGLAPNESE
ALGLVALMELQASRMHARTDAQGRPVLLLDQDRSRWDPLLIRRGLAALERATKLGGVRGPYALQAALAACHARARRAADT
DWAQIVALYDALVEVAPSPVVELNRAVAVGMAFGPAAALELVDALRDDPALARYHWLPSVRGDLLAKLGRADEAKAEFRR
AAALTRNERERELLLKRATDA

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 45895; Mature: 45764

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDATHRAIEAVWRIEAPKIIARAARVVRDVGVAEELAQDTLVAALEHWPVDGVPDNPA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AWLMTAVKRRALDRVRQEALHATKRSQLGHELDALEAHVVPDIADALADARDDDIGDDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RLIFTSCHPVLSTDARVALTLRLLGGLTTGEIARAFLTPEPTIAQRIVRAKRTLAAARVP
HHHHHHCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
FEVPAADARPARLASVLEVIYLIFNEGYAATAGDDWMRPALCDEALRLGRVLAGLAPNES
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
EALGLVALMELQASRMHARTDAQGRPVLLLDQDRSRWDPLLIRRGLAALERATKLGGVRG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PYALQAALAACHARARRAADTDWAQIVALYDALVEVAPSPVVELNRAVAVGMAFGPAAAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHH
ELVDALRDDPALARYHWLPSVRGDLLAKLGRADEAKAEFRRAAALTRNERERELLLKRAT
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHC
DA
CC
>Mature Secondary Structure 
THDATHRAIEAVWRIEAPKIIARAARVVRDVGVAEELAQDTLVAALEHWPVDGVPDNPA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AWLMTAVKRRALDRVRQEALHATKRSQLGHELDALEAHVVPDIADALADARDDDIGDDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RLIFTSCHPVLSTDARVALTLRLLGGLTTGEIARAFLTPEPTIAQRIVRAKRTLAAARVP
HHHHHHCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
FEVPAADARPARLASVLEVIYLIFNEGYAATAGDDWMRPALCDEALRLGRVLAGLAPNES
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
EALGLVALMELQASRMHARTDAQGRPVLLLDQDRSRWDPLLIRRGLAALERATKLGGVRG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PYALQAALAACHARARRAADTDWAQIVALYDALVEVAPSPVVELNRAVAVGMAFGPAAAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHH
ELVDALRDDPALARYHWLPSVRGDLLAKLGRADEAKAEFRRAAALTRNERERELLLKRAT
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHC
DA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]