Click here to switch to the map view.

The map label for this gene is yabI [H]

Identifier: 189352206

GI number: 189352206

Start: 245042

End: 247060

Strand: Direct

Name: yabI [H]

Synonym: BMULJ_03424

Alternate gene names: 189352206

Gene position: 245042-247060 (Clockwise)

Preceding gene: 189352205

Following gene: 189352207

Centisome position: 9.91

GC content: 73.95

Gene sequence:

>2019_bases
ATGAGCGCCGCCATTCACGCCTGGCTTGCCGAGATCGGCGCGCATCCGGCGCTCGCGCTCGCGATCGTGTTCGCGACCGC
ATGCGCGGAGGCGATCGCGCTGATCGGCACGGTCGTGCCGGCCGGCGCCGTGATGTTCGCGGCCGGCGCGCTCGCGGGCG
CGGGCGCGCTCGATCCGTGGACGACGATCGGTGTCGCGGCCGTCGGCGCGATCGTCGGCGACGGAATCAGCTACGAGCTC
GGACGGTACTACCGCGGAATGATCCGCAACGGCTGGGCGCGCTTCGGGCATGCGGCCGTCTACGCGCGCGGCGAGCAGTT
CGTGCTGCGTCACGGGACGAAGAGCATCGTGCTCGCGCGTTTTCTCGCGCCCGTGCGCGCAGTCGTGCCGGTCGTGGTCG
GCTGCGCGACGCTGCCGCGCCGGTCGTTCTATCCCGTCAACATCGTGTCGGCGCTCGTCTGGGCGCCCGTGCATATCGCG
CCGGGGATGCTGTTCGGTGCGTCGGCCGCGCTTGCCGCCGCGCTCAGCGTGCGGATTGCGGCGATCCTGCTCGTCGTCGC
CGCGCTCGTGCTCGGCGTCTGGTACGGCGTGCGCCTGCTGCTGCGGCGCGGCTGGCCGCTGCTGCACGCGGCGTTCGCCG
CTACGCTGCATGCATGCGTGCGCCACTGGCCGCGGGTCGGCGCGCGGCTGCACGACAGCCTCGTGCATCTGCGCCGGCTG
CCGGGCGCCGTGCCGGTGCTCGCGCTGCTGTTCGTCGCGAGCGTATGGCTGTTCGGCCGGATCGTGCAGGACGTCGTCGC
GAACGCGCCGCTGATGCATGCCGACGTCGCGCTGTACGCGCTCCTGCAGAACCTGCGCACGCCACCCGTCGACGCCGCGA
TGCGCGCGGTCGTCGTGCTGCACGGCCGCGACGCGGGGCTCATCGTGTCGGCCGCGTTTCTCGCGTGGCTCGCGATTCAC
CGCTGTTGGGCGAGCGCCGCATGGTGGCTCGCGACGGTCGGCATCGCGGTCGTGCTCGTACCCGCGTTCGGCGTCGTGCC
GCCGGGGGCGACGCCGGCGGCGCTACCGCCCGGTGCGGCGCACATGCCGCTGCCCGATGCCGACGCGGCGTTCGCGATCC
TCGCGAGCAGCGGGATCGGCTGGCTGCTCGCGCGCGACCGGCCCGCGCGCTGGCGCACGCCGGTCGTGACGGCGGTCGTG
CTGTGGATCGTGCTCGGCGGCTTCGCGCGGCTCTACGTCGGCGATACGTGGCTGTCGGGGCTGGTCGGCGGCTGGAGCCT
CGGGCTGGCGTGGTTCGCGCTGCTGGCCGGCGCGCATGCGTACTGGCGCGTGCGCGAGCACGTGCAGCCGGTCGGCGCGA
CCGTCGCGCTCGCGGTCGTGCTCGCGACGGTCGGCGTGTGGCTGGTGCCCGCGCAATGGGACGCCGATCGCGCCGCGCGT
CCGCATGCGGGCGACGTCGTCGCGATGACGGTCGACCAGTGGATGCGCGGCGGCTGGCAACGCGTGCCGACGCGCCGCAC
CGAGATCGGCGGCGATCGCGAGGAATACTTGCCGCTGCAGTGGTGCGCGACGTCCGACACGCTGGACCGCCATCTCGCGC
AGGCCGGCTGGCAGCGCGCGACGCCGTGGACGCTGCAGACCGCGCTGCGCTGGCTGATGCCGCAGGGGCCGGCCGAGTCG
CTGCCGGTGCTGCCGCGCTACACGCACGGCGAGAGCACGCGGCGTGTGTTCGTGCGCGCCGATCCGGCGCACGCGGACAG
CCGTCTCGTGCTGCGGCTGTGGCGCTATCCGTACGCGCTGTCGGATGCGCGCGGCACGCGCGCGCTGTGGTACGGCGCGC
TCTATCGCGAGGCGCTGCATCGGCCTGCCCGGCTGATGACGGTCGTACGCTCGACGCCGATCGACGATGCGCGGACGCTC
ACGCAAACGCTCGCAGTCGAGCCGACGATCGTGCATGCGCCGCGCGGGCTGGTGGCCGCGCCGGGCGGTGTGCTGCTCGT
GTGGTCGGCCGAGCCTTGA

Upstream 100 bases:

>100_bases
CGGCCGGCGGCGCGCGGGCGCGGCGCCAGTTCTCCTTCCCCTTTGCCCGGCGCTGCGCGCGCGGACGGCGCCGCGCCGCG
TCGCGGTGCGGGAGCGCGCG

Downstream 100 bases:

>100_bases
ATATGCGTGTCGGCTGGGCGGATGGCGGGGCGCTCAAGTTGATGTGTGCCGCGGTGTCGATGGGATCCATTGTGCGGCGC
GCGGCCCGTGCAAATAAAAA

Product: membrane-associated phospholipid phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 671

Protein sequence:

>672_residues
MSAAIHAWLAEIGAHPALALAIVFATACAEAIALIGTVVPAGAVMFAAGALAGAGALDPWTTIGVAAVGAIVGDGISYEL
GRYYRGMIRNGWARFGHAAVYARGEQFVLRHGTKSIVLARFLAPVRAVVPVVVGCATLPRRSFYPVNIVSALVWAPVHIA
PGMLFGASAALAAALSVRIAAILLVVAALVLGVWYGVRLLLRRGWPLLHAAFAATLHACVRHWPRVGARLHDSLVHLRRL
PGAVPVLALLFVASVWLFGRIVQDVVANAPLMHADVALYALLQNLRTPPVDAAMRAVVVLHGRDAGLIVSAAFLAWLAIH
RCWASAAWWLATVGIAVVLVPAFGVVPPGATPAALPPGAAHMPLPDADAAFAILASSGIGWLLARDRPARWRTPVVTAVV
LWIVLGGFARLYVGDTWLSGLVGGWSLGLAWFALLAGAHAYWRVREHVQPVGATVALAVVLATVGVWLVPAQWDADRAAR
PHAGDVVAMTVDQWMRGGWQRVPTRRTEIGGDREEYLPLQWCATSDTLDRHLAQAGWQRATPWTLQTALRWLMPQGPAES
LPVLPRYTHGESTRRVFVRADPAHADSRLVLRLWRYPYALSDARGTRALWYGALYREALHRPARLMTVVRSTPIDDARTL
TQTLAVEPTIVHAPRGLVAAPGGVLLVWSAEP

Sequences:

>Translated_672_residues
MSAAIHAWLAEIGAHPALALAIVFATACAEAIALIGTVVPAGAVMFAAGALAGAGALDPWTTIGVAAVGAIVGDGISYEL
GRYYRGMIRNGWARFGHAAVYARGEQFVLRHGTKSIVLARFLAPVRAVVPVVVGCATLPRRSFYPVNIVSALVWAPVHIA
PGMLFGASAALAAALSVRIAAILLVVAALVLGVWYGVRLLLRRGWPLLHAAFAATLHACVRHWPRVGARLHDSLVHLRRL
PGAVPVLALLFVASVWLFGRIVQDVVANAPLMHADVALYALLQNLRTPPVDAAMRAVVVLHGRDAGLIVSAAFLAWLAIH
RCWASAAWWLATVGIAVVLVPAFGVVPPGATPAALPPGAAHMPLPDADAAFAILASSGIGWLLARDRPARWRTPVVTAVV
LWIVLGGFARLYVGDTWLSGLVGGWSLGLAWFALLAGAHAYWRVREHVQPVGATVALAVVLATVGVWLVPAQWDADRAAR
PHAGDVVAMTVDQWMRGGWQRVPTRRTEIGGDREEYLPLQWCATSDTLDRHLAQAGWQRATPWTLQTALRWLMPQGPAES
LPVLPRYTHGESTRRVFVRADPAHADSRLVLRLWRYPYALSDARGTRALWYGALYREALHRPARLMTVVRSTPIDDARTL
TQTLAVEPTIVHAPRGLVAAPGGVLLVWSAEP
>Mature_671_residues
SAAIHAWLAEIGAHPALALAIVFATACAEAIALIGTVVPAGAVMFAAGALAGAGALDPWTTIGVAAVGAIVGDGISYELG
RYYRGMIRNGWARFGHAAVYARGEQFVLRHGTKSIVLARFLAPVRAVVPVVVGCATLPRRSFYPVNIVSALVWAPVHIAP
GMLFGASAALAAALSVRIAAILLVVAALVLGVWYGVRLLLRRGWPLLHAAFAATLHACVRHWPRVGARLHDSLVHLRRLP
GAVPVLALLFVASVWLFGRIVQDVVANAPLMHADVALYALLQNLRTPPVDAAMRAVVVLHGRDAGLIVSAAFLAWLAIHR
CWASAAWWLATVGIAVVLVPAFGVVPPGATPAALPPGAAHMPLPDADAAFAILASSGIGWLLARDRPARWRTPVVTAVVL
WIVLGGFARLYVGDTWLSGLVGGWSLGLAWFALLAGAHAYWRVREHVQPVGATVALAVVLATVGVWLVPAQWDADRAARP
HAGDVVAMTVDQWMRGGWQRVPTRRTEIGGDREEYLPLQWCATSDTLDRHLAQAGWQRATPWTLQTALRWLMPQGPAESL
PVLPRYTHGESTRRVFVRADPAHADSRLVLRLWRYPYALSDARGTRALWYGALYREALHRPARLMTVVRSTPIDDARTLT
QTLAVEPTIVHAPRGLVAAPGGVLLVWSAEP

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=194, Percent_Identity=29.8969072164948, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788656, Length=185, Percent_Identity=29.1891891891892, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789384, Length=142, Percent_Identity=31.6901408450704, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 72007; Mature: 71876

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAIHAWLAEIGAHPALALAIVFATACAEAIALIGTVVPAGAVMFAAGALAGAGALDPW
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TTIGVAAVGAIVGDGISYELGRYYRGMIRNGWARFGHAAVYARGEQFVLRHGTKSIVLAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCHHEECCCCHHHHHHH
FLAPVRAVVPVVVGCATLPRRSFYPVNIVSALVWAPVHIAPGMLFGASAALAAALSVRIA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AILLVVAALVLGVWYGVRLLLRRGWPLLHAAFAATLHACVRHWPRVGARLHDSLVHLRRL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGAVPVLALLFVASVWLFGRIVQDVVANAPLMHADVALYALLQNLRTPPVDAAMRAVVVL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEE
HGRDAGLIVSAAFLAWLAIHRCWASAAWWLATVGIAVVLVPAFGVVPPGATPAALPPGAA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HMPLPDADAAFAILASSGIGWLLARDRPARWRTPVVTAVVLWIVLGGFARLYVGDTWLSG
CCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGGWSLGLAWFALLAGAHAYWRVREHVQPVGATVALAVVLATVGVWLVPAQWDADRAAR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
PHAGDVVAMTVDQWMRGGWQRVPTRRTEIGGDREEYLPLQWCATSDTLDRHLAQAGWQRA
CCCCCEEEEEHHHHHCCCHHCCCCCHHHCCCCHHHCCCCEEECCHHHHHHHHHHHCCCCC
TPWTLQTALRWLMPQGPAESLPVLPRYTHGESTRRVFVRADPAHADSRLVLRLWRYPYAL
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEE
SDARGTRALWYGALYREALHRPARLMTVVRSTPIDDARTLTQTLAVEPTIVHAPRGLVAA
CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCEEC
PGGVLLVWSAEP
CCCEEEEEECCC
>Mature Secondary Structure 
SAAIHAWLAEIGAHPALALAIVFATACAEAIALIGTVVPAGAVMFAAGALAGAGALDPW
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TTIGVAAVGAIVGDGISYELGRYYRGMIRNGWARFGHAAVYARGEQFVLRHGTKSIVLAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCHHEECCCCHHHHHHH
FLAPVRAVVPVVVGCATLPRRSFYPVNIVSALVWAPVHIAPGMLFGASAALAAALSVRIA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AILLVVAALVLGVWYGVRLLLRRGWPLLHAAFAATLHACVRHWPRVGARLHDSLVHLRRL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGAVPVLALLFVASVWLFGRIVQDVVANAPLMHADVALYALLQNLRTPPVDAAMRAVVVL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEE
HGRDAGLIVSAAFLAWLAIHRCWASAAWWLATVGIAVVLVPAFGVVPPGATPAALPPGAA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HMPLPDADAAFAILASSGIGWLLARDRPARWRTPVVTAVVLWIVLGGFARLYVGDTWLSG
CCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGGWSLGLAWFALLAGAHAYWRVREHVQPVGATVALAVVLATVGVWLVPAQWDADRAAR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
PHAGDVVAMTVDQWMRGGWQRVPTRRTEIGGDREEYLPLQWCATSDTLDRHLAQAGWQRA
CCCCCEEEEEHHHHHCCCHHCCCCCHHHCCCCHHHCCCCEEECCHHHHHHHHHHHCCCCC
TPWTLQTALRWLMPQGPAESLPVLPRYTHGESTRRVFVRADPAHADSRLVLRLWRYPYAL
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEE
SDARGTRALWYGALYREALHRPARLMTVVRSTPIDDARTLTQTLAVEPTIVHAPRGLVAA
CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCEEC
PGGVLLVWSAEP
CCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]