Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184841
Identifier: 189184841
GI number: 189184841
Start: 1967373
End: 1968248
Strand: Reverse
Name: 189184841
Synonym: OTT_1934
Alternate gene names: NA
Gene position: 1968248-1967373 (Counterclockwise)
Preceding gene: 189184842
Following gene: 189184839
Centisome position: 97.97
GC content: 28.54
Gene sequence:
>876_bases ATGAAAAAATGTATTATAACAGTATACTATCTAATAGACAATTTTTGTAAGATATATCAAGAGTGGGAAAGAAAGAGATT AATACCAAGTAATGGTCAAAGGAACAGAGATGGAAAGTTATCTTTAGCTGAGTTATTAACAATAGTGATATATTTTTATT TATCTCCATGCAAGGATTTTAAAAATTATTATCTATATTACTTGTGTCATAAGTATAAAGGATACTTTTGTTTGCCAAGC TATAGTAGGATAATACAACTATTACCTAGAATGTTGCTACCATTAGCAGTATTAATGCATTATCTGAAAGGAGATGAGAC TGGTATATATTACATCGATTCTACAAAGTTAGCAATTTGTCATAATAAACGTACTTACAGCAATAGAGTTTTTAACAGAA TTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTTAGGCTTTAAACTACATATTATAATCAATAATAAAGGTGAAATA ATGTCAGTTAAAATTACTAAAGGCAATAAAAGCGACCTATCTATGGCTTCAGTTATTTCTAAAGGCTTATCTGGTAAATT GTTTGGTGATAAAGCTTACATATCTAAAAAGTTATTTCATCAACTGTTGTCCAACGGTTTACGTTTATTTACTAATCTTC GTAAAGATATGAAAACATATTTATTGGACATAGAAGATAAGCGGTTATTAAATAAACGTTCCTTAATTGAATCTGTCTTT AATGTACTAAAAAAACATATGCATTTAGAGTATACTCGACATCGCTCCCCTATTAATTTCTTTGTTCATATAATTTCTTC TCTTGCCAGTTATTCTATCTCTAAACTTAATCCCTATCTTATCTCCTCTTCTTTTTCTTCTAACTCCTTATCCTAA
Upstream 100 bases:
>100_bases TTAGGATAAGCGGAAAATATGAAAGGTAGAGAATAAAAGGTATACAAAGAGAGAATGTTGAGTTATAAAAAAAATTTAAA TAAACAAGGAATAACCCAAC
Downstream 100 bases:
>100_bases TCTGGCGTTAATAAAGGCAGTATTATTATTTGAGATCATAATCTTAACACCTTTATTTGTTAATTCTTGGACAAAATCCC GTAATCTAATTTGATCTTTT
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Protease; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLCHKYKGYFCLPS YSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAICHNKRTYSNRVFNRISKIGKSSYGWFLGFKLHIIINNKGEI MSVKITKGNKSDLSMASVISKGLSGKLFGDKAYISKKLFHQLLSNGLRLFTNLRKDMKTYLLDIEDKRLLNKRSLIESVF NVLKKHMHLEYTRHRSPINFFVHIISSLASYSISKLNPYLISSSFSSNSLS
Sequences:
>Translated_291_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLCHKYKGYFCLPS YSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAICHNKRTYSNRVFNRISKIGKSSYGWFLGFKLHIIINNKGEI MSVKITKGNKSDLSMASVISKGLSGKLFGDKAYISKKLFHQLLSNGLRLFTNLRKDMKTYLLDIEDKRLLNKRSLIESVF NVLKKHMHLEYTRHRSPINFFVHIISSLASYSISKLNPYLISSSFSSNSLS >Mature_291_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLCHKYKGYFCLPS YSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAICHNKRTYSNRVFNRISKIGKSSYGWFLGFKLHIIINNKGEI MSVKITKGNKSDLSMASVISKGLSGKLFGDKAYISKKLFHQLLSNGLRLFTNLRKDMKTYLLDIEDKRLLNKRSLIESVF NVLKKHMHLEYTRHRSPINFFVHIISSLASYSISKLNPYLISSSFSSNSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34041; Mature: 34041
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KNYYLYYLCHKYKGYFCLPSYSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAIC HHHEEHEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEE HNKRTYSNRVFNRISKIGKSSYGWFLGFKLHIIINNKGEIMSVKITKGNKSDLSMASVIS ECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHH KGLSGKLFGDKAYISKKLFHQLLSNGLRLFTNLRKDMKTYLLDIEDKRLLNKRSLIESVF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH NVLKKHMHLEYTRHRSPINFFVHIISSLASYSISKLNPYLISSSFSSNSLS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC >Mature Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KNYYLYYLCHKYKGYFCLPSYSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAIC HHHEEHEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEE HNKRTYSNRVFNRISKIGKSSYGWFLGFKLHIIINNKGEIMSVKITKGNKSDLSMASVIS ECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHH KGLSGKLFGDKAYISKKLFHQLLSNGLRLFTNLRKDMKTYLLDIEDKRLLNKRSLIESVF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH NVLKKHMHLEYTRHRSPINFFVHIISSLASYSISKLNPYLISSSFSSNSLS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA