Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184831

Identifier: 189184831

GI number: 189184831

Start: 1957003

End: 1958208

Strand: Reverse

Name: 189184831

Synonym: OTT_1924

Alternate gene names: NA

Gene position: 1958208-1957003 (Counterclockwise)

Preceding gene: 189184833

Following gene: 189184830

Centisome position: 97.47

GC content: 31.51

Gene sequence:

>1206_bases
TTGGCAGGAGATAAGGCGAATATTTCAATTAACAGAAGATCTTTCGGTAAAATCAGTGGATCGTTCATAACAATCGCAAA
GCGAAATGCAAATGACCCTAATATAACAATTATAGCAGAAGGCGCTGAAACAGCATTGAGCTTGCAGCAATCAGGCATTA
AAGGTAATATCATTGCTAGTGCAGGAATTTCGAATTTGAGAAATTATTCACCATTTCCTGGTGAAAAAATCATCATTGCA
GCAGATAATGATAGCAAAAATCCTATAACTAATAATACTGTAATTAAAGCTGCAAAAACGTTAGAAATGAAGGGAGCGAT
AACTTGTATAGTCAAACCACCAGAAAATGGTGATTTTAATAATCTGTTGCAAAGTTGTGGAGACCAGTCAATTAGAGACA
TTATAGAACCTGAAATTACTAAACTGACTAAGGCAGTTGAAACAACAAAACTTACTCAAACAGAAAATAATAGTATAGCA
AAACAAAATGATATTACAAATGTTAAAGAATTGTATAATAAATCGTCATCTCTATACTATTTAAAACAAGAAGAGGAAGC
TAAGGTGGAAGCGATAGTAGTAAACAAATTTTTAGAAAACCATACAGGAATTTATAGTTCAAAAATCTTTAATAATCCTA
ATTTAAGGGCAAATATGGTTTTTGATGAAGAGACTCAAAAATCCTGGCCTGCACTCACTATTTTTGTTGAAAATGACAAA
GATGAAATTACTGGAGCTAAGATATTAACTCTGAATTCAAAAACATGTAATAAAGCTGATATTCCAGAAAAATCTGTTGG
TACAATTAGTGGCTCATTTGCTGAAATTGCTCAACAAAATTCAAAATATTCACCTGTAACAATTATTACAAAAGATATTG
AAACAGCGTTAACCATTAGGCAAGCTGGAGTTGAAGGAAAAATCTTATGTGCAATTGAAGCCGAAAATTTGCAAAACTAT
AATCCTGGCCCAAAAGAAAAGATTATTCTAGCAGTTAAAAATGACGTAAATACTGAAAAAGCTGAAAAAGTTCTAGAGGA
TAAGGAAGCAGTAGTCTGTACAGTCAAAAATGACTTCAATAATGTATTAAAAACTCAAGGATTATATGCTGTTAGAAATA
TTATCAGCCCTGAAATAAGAAAACTTAATGAAAAAATTGAATCAATACAAACTAATATACAACCAGGATTATGTCCGAAA
CACTAG

Upstream 100 bases:

>100_bases
ATAAACCTTCTGAGAAACGAGAGAAAATTATCCAGCATTTACAGCATTTGCAAGAAATTCAAAAGGGGAAATTACCGGAG
TACAGGCCATATATCTAAAT

Downstream 100 bases:

>100_bases
GCAGAGTATGACACAGCATTTTTTATTTAAAAAACTATAGAGTGAAAAAATATGACAAAAAAATTAAAGCATGATTCATT
GGCAAAGACAATCATGAGTG

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugative Transfer Protein TraI; Conjugal Transfer Protein TraA; MobA/MobL Family Protein

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MAGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIA
ADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIA
KQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSSKIFNNPNLRANMVFDEETQKSWPALTIFVENDK
DEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNY
NPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPK
H

Sequences:

>Translated_401_residues
MAGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIA
ADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIA
KQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSSKIFNNPNLRANMVFDEETQKSWPALTIFVENDK
DEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNY
NPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPK
H
>Mature_400_residues
AGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAA
DNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAK
QNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSSKIFNNPNLRANMVFDEETQKSWPALTIFVENDKD
EITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYN
PGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43999; Mature: 43868

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEGAETALSLQQSGIKGNIIAS
CCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEE
AGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFN
CCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCEEEEEEECCCCCCHH
NLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYY
HHHHHCCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHCCCCCEEE
LKQEEEAKVEAIVVNKFLENHTGIYSSKIFNNPNLRANMVFDEETQKSWPALTIFVENDK
EECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEECCC
DEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIR
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHH
QAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFN
HCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHH
NVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
HHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEGAETALSLQQSGIKGNIIAS
CCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEE
AGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFN
CCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCEEEEEEECCCCCCHH
NLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYY
HHHHHCCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHCCCCCEEE
LKQEEEAKVEAIVVNKFLENHTGIYSSKIFNNPNLRANMVFDEETQKSWPALTIFVENDK
EECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEECCC
DEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIR
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHH
QAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFN
HCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHH
NVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
HHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA