Click here to switch to the map view.

The map label for this gene is yahD [C]

Identifier: 189184819

GI number: 189184819

Start: 1947492

End: 1948502

Strand: Reverse

Name: yahD [C]

Synonym: OTT_1912

Alternate gene names: 189184819

Gene position: 1948502-1947492 (Counterclockwise)

Preceding gene: 189184830

Following gene: 189184808

Centisome position: 96.99

GC content: 33.23

Gene sequence:

>1011_bases
ATGTATAAGGTTTTACCGCTTCGTGCTCGCCTATTATATGCTACTGCAAGGAATATTTTTAGTACTCAAAATAGGCATAT
ATTACCTTATATTGCTTACAAAGGCGATATAGAATTATTACAGCATCTCATAGATCATGGAATCGATGTTAATACTACAA
ATCACTGGGACAACACTGCGTTACATGTTGCTTCTTACCATGGAAACATAGCTATGGTCAATCTTTTATTAGATAATAAT
GCTAATCCAAATTTACAAGATGCAAATCTTCATACTCCTTTACATTTTGCAATTTCGAATGGGCACATTGATATTGTACG
TCTTCTGTTAAATCATGAATCTGATGTTAATTTAATAAGTAAATTTAATGAAACTGCTTTAGATGTGGCTTGGATAAAGT
ATACTGAAAATTTAGAGCAGAGTTATTTAGCAACAGTAAGATTATTAATTACTCACATAGTTAGGATAGAACATGCTAAC
TTAGTAGATACTAGTTCACAAGGTTTTTTACACAATAAAGGGCTTATTAATGAATCAGAACAGCTAAAGGAACTTGAACA
ACAATGTCATAAAGAAATAGAAGAAATGTGCTCTATCTCTGTTGGCAGCAGCAGTTGTCTATCTTTTTTTGATATATTTG
TTCTGAAAAAAGACATGAATATACTAGCAAGATGTGCAAATAATCCTGATATTGTAAGGCATCAGAATAAATTTTCCATG
TATTCTCCCTTTATTGAAAAATCTATTGAAGAAGGGGAAAAAAGAGCAAAGCTGCTACAAGGAGCAGTTGAATCAATAGA
TGAGATATTTGAATCCAATCAGGACGCTTCTCAAAAAAGTCAGACATCTTGGTCTCACTTGCCACCAGAAGTAAGGTTTA
TGATATTAGAGAATTTAGATAACGATGATTTAACAAAAATTCAACGCACTGATGTAGCAGAAGCTGGTGAAGCTGGTGCT
GAAGTTGAAGCTGAAGTTGGAGGAGCACATGCTATATATGAGGAAGAATAG

Upstream 100 bases:

>100_bases
TCAACTTTGAATTGTATTACTGTTCGTTTAATGTATAATAATATCAATATTTAATGTGTAATAACTTTTGAGAGTATAAT
ATAATTTTAGTGGAAGAATT

Downstream 100 bases:

>100_bases
CACAGATATTAAAGCTCTCTGTAGCATTGGTTGTTGTAGATCGCTTGTTCCATACTGTGGAGCTGCCATAGTAGCTAAAA
TAGATGGAAAGTTAGATAAA

Product: ankyrin repeat-containing protein 06_04

Products: NA

Alternate protein names: Ankyrin Repeat-Containing

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MYKVLPLRARLLYATARNIFSTQNRHILPYIAYKGDIELLQHLIDHGIDVNTTNHWDNTALHVASYHGNIAMVNLLLDNN
ANPNLQDANLHTPLHFAISNGHIDIVRLLLNHESDVNLISKFNETALDVAWIKYTENLEQSYLATVRLLITHIVRIEHAN
LVDTSSQGFLHNKGLINESEQLKELEQQCHKEIEEMCSISVGSSSCLSFFDIFVLKKDMNILARCANNPDIVRHQNKFSM
YSPFIEKSIEEGEKRAKLLQGAVESIDEIFESNQDASQKSQTSWSHLPPEVRFMILENLDNDDLTKIQRTDVAEAGEAGA
EVEAEVGGAHAIYEEE

Sequences:

>Translated_336_residues
MYKVLPLRARLLYATARNIFSTQNRHILPYIAYKGDIELLQHLIDHGIDVNTTNHWDNTALHVASYHGNIAMVNLLLDNN
ANPNLQDANLHTPLHFAISNGHIDIVRLLLNHESDVNLISKFNETALDVAWIKYTENLEQSYLATVRLLITHIVRIEHAN
LVDTSSQGFLHNKGLINESEQLKELEQQCHKEIEEMCSISVGSSSCLSFFDIFVLKKDMNILARCANNPDIVRHQNKFSM
YSPFIEKSIEEGEKRAKLLQGAVESIDEIFESNQDASQKSQTSWSHLPPEVRFMILENLDNDDLTKIQRTDVAEAGEAGA
EVEAEVGGAHAIYEEE
>Mature_336_residues
MYKVLPLRARLLYATARNIFSTQNRHILPYIAYKGDIELLQHLIDHGIDVNTTNHWDNTALHVASYHGNIAMVNLLLDNN
ANPNLQDANLHTPLHFAISNGHIDIVRLLLNHESDVNLISKFNETALDVAWIKYTENLEQSYLATVRLLITHIVRIEHAN
LVDTSSQGFLHNKGLINESEQLKELEQQCHKEIEEMCSISVGSSSCLSFFDIFVLKKDMNILARCANNPDIVRHQNKFSM
YSPFIEKSIEEGEKRAKLLQGAVESIDEIFESNQDASQKSQTSWSHLPPEVRFMILENLDNDDLTKIQRTDVAEAGEAGA
EVEAEVGGAHAIYEEE

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI215598574, Length=127, Percent_Identity=37.7952755905512, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI70780357, Length=127, Percent_Identity=37.7952755905512, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI70780359, Length=127, Percent_Identity=37.7952755905512, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI70780353, Length=127, Percent_Identity=37.7952755905512, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI70780355, Length=127, Percent_Identity=37.7952755905512, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI116063534, Length=162, Percent_Identity=31.4814814814815, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI20270347, Length=121, Percent_Identity=33.8842975206612, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI24233530, Length=97, Percent_Identity=41.2371134020619, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI163914396, Length=101, Percent_Identity=37.6237623762376, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI7705748, Length=101, Percent_Identity=37.6237623762376, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI46519154, Length=154, Percent_Identity=33.7662337662338, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI46519151, Length=154, Percent_Identity=33.7662337662338, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI268607506, Length=96, Percent_Identity=38.5416666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI34304381, Length=210, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI157266328, Length=95, Percent_Identity=38.9473684210526, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI268607514, Length=96, Percent_Identity=38.5416666666667, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI34304379, Length=210, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI268607512, Length=96, Percent_Identity=38.5416666666667, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI46519147, Length=154, Percent_Identity=33.7662337662338, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI37221187, Length=122, Percent_Identity=33.6065573770492, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI31581522, Length=122, Percent_Identity=33.6065573770492, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI37221184, Length=122, Percent_Identity=33.6065573770492, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI37221182, Length=122, Percent_Identity=33.6065573770492, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI68131557, Length=97, Percent_Identity=40.2061855670103, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI37620163, Length=154, Percent_Identity=33.7662337662338, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI304361760, Length=97, Percent_Identity=40.2061855670103, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI304361757, Length=97, Percent_Identity=40.2061855670103, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI194018403, Length=96, Percent_Identity=34.375, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI39812133, Length=99, Percent_Identity=34.3434343434343, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32967601, Length=122, Percent_Identity=32.7868852459016, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI52426737, Length=145, Percent_Identity=33.7931034482759, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI188595682, Length=145, Percent_Identity=33.7931034482759, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555340, Length=131, Percent_Identity=35.1145038167939, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71981411, Length=155, Percent_Identity=31.6129032258064, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71997655, Length=96, Percent_Identity=40.625, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI221330735, Length=107, Percent_Identity=38.3177570093458, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221330733, Length=107, Percent_Identity=38.3177570093458, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28571867, Length=151, Percent_Identity=31.7880794701987, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571865, Length=151, Percent_Identity=31.7880794701987, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082081, Length=125, Percent_Identity=35.2, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082106, Length=125, Percent_Identity=35.2, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161082096, Length=125, Percent_Identity=35.2, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161082110, Length=125, Percent_Identity=35.2, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161082085, Length=124, Percent_Identity=35.4838709677419, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24656431, Length=81, Percent_Identity=40.7407407407407, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666367, Length=102, Percent_Identity=34.3137254901961, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24656436, Length=81, Percent_Identity=40.7407407407407, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI161082099, Length=124, Percent_Identity=35.4838709677419, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281365976, Length=137, Percent_Identity=31.3868613138686, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24661997, Length=137, Percent_Identity=31.3868613138686, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI281366284, Length=96, Percent_Identity=38.5416666666667, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38052; Mature: 38052

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKVLPLRARLLYATARNIFSTQNRHILPYIAYKGDIELLQHLIDHGIDVNTTNHWDNTA
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCE
LHVASYHGNIAMVNLLLDNNANPNLQDANLHTPLHFAISNGHIDIVRLLLNHESDVNLIS
EEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHH
KFNETALDVAWIKYTENLEQSYLATVRLLITHIVRIEHANLVDTSSQGFLHNKGLINESE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCHH
QLKELEQQCHKEIEEMCSISVGSSSCLSFFDIFVLKKDMNILARCANNPDIVRHQNKFSM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHH
YSPFIEKSIEEGEKRAKLLQGAVESIDEIFESNQDASQKSQTSWSHLPPEVRFMILENLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCCHHHEEHEECCCC
NDDLTKIQRTDVAEAGEAGAEVEAEVGGAHAIYEEE
CCHHHHHHHHCHHHCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MYKVLPLRARLLYATARNIFSTQNRHILPYIAYKGDIELLQHLIDHGIDVNTTNHWDNTA
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCE
LHVASYHGNIAMVNLLLDNNANPNLQDANLHTPLHFAISNGHIDIVRLLLNHESDVNLIS
EEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHH
KFNETALDVAWIKYTENLEQSYLATVRLLITHIVRIEHANLVDTSSQGFLHNKGLINESE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCHH
QLKELEQQCHKEIEEMCSISVGSSSCLSFFDIFVLKKDMNILARCANNPDIVRHQNKFSM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHH
YSPFIEKSIEEGEKRAKLLQGAVESIDEIFESNQDASQKSQTSWSHLPPEVRFMILENLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCCHHHEEHEECCCC
NDDLTKIQRTDVAEAGEAGAEVEAEVGGAHAIYEEE
CCHHHHHHHHCHHHCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA