Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184768

Identifier: 189184768

GI number: 189184768

Start: 1895800

End: 1896117

Strand: Reverse

Name: 189184768

Synonym: OTT_1861

Alternate gene names: NA

Gene position: 1896117-1895800 (Counterclockwise)

Preceding gene: 189184769

Following gene: 189184764

Centisome position: 94.38

GC content: 27.04

Gene sequence:

>318_bases
ATGAATTGGCAAGAGTTCTACAGGATGGTTTTTAAATGTAAGCTGCATATATTTATTAATCATCATGGAGATATTGTGAG
TTTTTTTACTCTAACTTCAGACAATGTTAATGATAGAATAGTAGTAGAATATTTAGTATGCAAACTTAAAGGATGGCTAT
TTGCTGATCATGGATTTATTAGCAAAAAACTTGTTGTATCACTTACTAACCAAGGTTTAAAGCTAATCACAAAAATTAGA
TCCAACATGAAAGAAAAAGTAATTCATCCTATAAAATTTTCACTTCTTAACAAAAGGTATATTATAGAAACTATATAA

Upstream 100 bases:

>100_bases
TGTCAGGGAAAGAAACAGGGAAATATTATATTGATTCGACAAAGCTTCCTGTATCCAATAATCAGAGGATTTATAGGTAT
AAAGCATTTTAAAATAAAAC

Downstream 100 bases:

>100_bases
TGGTCAATTAAAACATCTTTTTCATATTGATCATACTTGCCAGAGATTCTGGTATGTATTTTTACACTAATGTTCTCTCT
GGATTGCTTGCTTATGTTTT

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Membrane-Associated Metal-Dependent Hydrolase; ISPg3 Transposase

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MNWQEFYRMVFKCKLHIFINHHGDIVSFFTLTSDNVNDRIVVEYLVCKLKGWLFADHGFISKKLVVSLTNQGLKLITKIR
SNMKEKVIHPIKFSLLNKRYIIETI

Sequences:

>Translated_105_residues
MNWQEFYRMVFKCKLHIFINHHGDIVSFFTLTSDNVNDRIVVEYLVCKLKGWLFADHGFISKKLVVSLTNQGLKLITKIR
SNMKEKVIHPIKFSLLNKRYIIETI
>Mature_105_residues
MNWQEFYRMVFKCKLHIFINHHGDIVSFFTLTSDNVNDRIVVEYLVCKLKGWLFADHGFISKKLVVSLTNQGLKLITKIR
SNMKEKVIHPIKFSLLNKRYIIETI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12457; Mature: 12457

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWQEFYRMVFKCKLHIFINHHGDIVSFFTLTSDNVNDRIVVEYLVCKLKGWLFADHGFI
CCHHHHHHHHHHHEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCC
SKKLVVSLTNQGLKLITKIRSNMKEKVIHPIKFSLLNKRYIIETI
CHHHHEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHCCEEEEEEC
>Mature Secondary Structure
MNWQEFYRMVFKCKLHIFINHHGDIVSFFTLTSDNVNDRIVVEYLVCKLKGWLFADHGFI
CCHHHHHHHHHHHEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCC
SKKLVVSLTNQGLKLITKIRSNMKEKVIHPIKFSLLNKRYIIETI
CHHHHEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA