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The map label for this gene is recR [H]

Identifier: 189184710

GI number: 189184710

Start: 1833658

End: 1834269

Strand: Reverse

Name: recR [H]

Synonym: OTT_1803

Alternate gene names: 189184710

Gene position: 1834269-1833658 (Counterclockwise)

Preceding gene: 189184711

Following gene: 189184709

Centisome position: 91.3

GC content: 31.54

Gene sequence:

>612_bases
ATGCATAAAGATTCTAATATAATAGACGAATTAATATTTTCTTTTGCTCAGTTGCCTGGATTAGGTAACCGCTCTGCTAG
GAGGATAGTGCTTTATTTAATGCAAGATAAGGAAGTTAGGATTAAAAATCTTAATAATCAATTAACTTCTGTGTTAAATA
ATATTATGGAATGTGATTATTGTGGAAATTTAGATATAGTTTCTATTTGTAATATTTGCAAACATTCTGAGCGTGATTCA
TCAACCATAGCGGTAGTTGAGTCTGTAGCAGATCTTTGGGCTTTGGAACGTAGTAAGGTTTTTAAAGGTTGGTATCATGT
TTTAGGGAAAACATTATCTGCTGTTAGCGGTAACGATGCTGTTAATAGCCTAAAATTACCTAAGTTATTGAATCGTATTC
GTGAGTATAAAGTACAAGAAATAATTTTAGCTACTAACTCAACAATAGATGGGCAAATGACTGCTTTTTTTGTTATTGAT
TATTTGAAAGATGAAAATTTAAAAATCTCAAAATTGGCTTCCGGAATTCCGTTAGGTGGTGAGTTAGATTATTTAGATGA
AGGTACTTTGTTGGCAGCATTTAAAGCTAGGCAATCTCATGATTTATTATGA

Upstream 100 bases:

>100_bases
GAAAATTGATTAAGATAACTTCATAAGGGGTTTCTTAAGAGCAAGAGTATAGCAAGGTGAAGGAAGAGTATAAAAGCTAA
AAGCGTAAAAGATTATTGTA

Downstream 100 bases:

>100_bases
TTTTAAATGATTTTTTAGTTGATATTTTTAGGCATGTTTGGGAAAGATTATTGATTTCTAGATTAAGAAAATCACAAAAT
ATATAGAATAGGTTTAAGTA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MHKDSNIIDELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCGNLDIVSICNICKHSERDS
STIAVVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAVNSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVID
YLKDENLKISKLASGIPLGGELDYLDEGTLLAAFKARQSHDLL

Sequences:

>Translated_203_residues
MHKDSNIIDELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCGNLDIVSICNICKHSERDS
STIAVVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAVNSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVID
YLKDENLKISKLASGIPLGGELDYLDEGTLLAAFKARQSHDLL
>Mature_203_residues
MHKDSNIIDELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCGNLDIVSICNICKHSERDS
STIAVVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAVNSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVID
YLKDENLKISKLASGIPLGGELDYLDEGTLLAAFKARQSHDLL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=197, Percent_Identity=33.502538071066, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22749; Mature: 22749

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKDSNIIDELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDY
CCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
CGNLDIVSICNICKHSERDSSTIAVVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDA
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VNSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGG
HHHCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
ELDYLDEGTLLAAFKARQSHDLL
CCCCCCCCCEEHHHHHHHCCCCC
>Mature Secondary Structure
MHKDSNIIDELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDY
CCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
CGNLDIVSICNICKHSERDSSTIAVVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDA
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VNSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGG
HHHCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
ELDYLDEGTLLAAFKARQSHDLL
CCCCCCCCCEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA