Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is pgsA [H]
Identifier: 189184671
GI number: 189184671
Start: 1785167
End: 1785715
Strand: Reverse
Name: pgsA [H]
Synonym: OTT_1764
Alternate gene names: 189184671
Gene position: 1785715-1785167 (Counterclockwise)
Preceding gene: 189184672
Following gene: 189184651
Centisome position: 88.89
GC content: 28.23
Gene sequence:
>549_bases ATGCAGTTAACCAGAAAAATACCAAATATTCTAACAGCTACTAGAATTAGTATAATACCAATTATACTAATTACTTTTTA TTTTGATGATGTTATTTTTTCCCATCAATTGGCAGCTACCTTATTTGTTATTGCTGGTATAACAGATTTTTTTGATGGGT ATATAGCTAGAAAACTTAATTTACATAGCAGTTTTGGTAGAATGCTTGATCATATTGCTGATAAATTATTAGTTGGCAGC ATTCTTATAATGATAGTAAAATTTAGAAAAGCTCAAGAGTTACCATGCTTATTAATTTTATGTCGAGAATTTTTAGTAGC TGGCATGAGAGAATTCTTAAGCCAAATTAAAGTTAGTGTTCCAGTATCTAGGCTTGCAAAAATAAAAACTACATGTCAAT TTTCTGCTTTAGCTATTTTACTATTAGGTTCTAAGGGATCTGGAATTCATATGTTAGATATAGTAGGACAAATTACTTTG TGGATAGCAGCAATCTTGACTATTATTACTGGATATTCTTACTTGAAAGTATGTATTAAATATTTTTAA
Upstream 100 bases:
>100_bases GTTGCAGTAAGCAACAGTATACAATTATGTATATGTTTAATTTCTTATAGAATAATTTTATAACGTAGTCTTAAAGAATT ATTAAAGAGCTAAAAACAAT
Downstream 100 bases:
>100_bases TTAGATCACTTTGAAAACTAAAGTTCCGGTATAATCTGAGTTGGATATAAGAGATCAGAGCTAATGTAAAGCAAGGAAAA GATAATTTAACTTAAGAAGA
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MQLTRKIPNILTATRISIIPIILITFYFDDVIFSHQLAATLFVIAGITDFFDGYIARKLNLHSSFGRMLDHIADKLLVGS ILIMIVKFRKAQELPCLLILCREFLVAGMREFLSQIKVSVPVSRLAKIKTTCQFSALAILLLGSKGSGIHMLDIVGQITL WIAAILTIITGYSYLKVCIKYF
Sequences:
>Translated_182_residues MQLTRKIPNILTATRISIIPIILITFYFDDVIFSHQLAATLFVIAGITDFFDGYIARKLNLHSSFGRMLDHIADKLLVGS ILIMIVKFRKAQELPCLLILCREFLVAGMREFLSQIKVSVPVSRLAKIKTTCQFSALAILLLGSKGSGIHMLDIVGQITL WIAAILTIITGYSYLKVCIKYF >Mature_182_residues MQLTRKIPNILTATRISIIPIILITFYFDDVIFSHQLAATLFVIAGITDFFDGYIARKLNLHSSFGRMLDHIADKLLVGS ILIMIVKFRKAQELPCLLILCREFLVAGMREFLSQIKVSVPVSRLAKIKTTCQFSALAILLLGSKGSGIHMLDIVGQITL WIAAILTIITGYSYLKVCIKYF
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=164, Percent_Identity=34.7560975609756, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20395; Mature: 20395
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTRKIPNILTATRISIIPIILITFYFDDVIFSHQLAATLFVIAGITDFFDGYIARKLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHSSFGRMLDHIADKLLVGSILIMIVKFRKAQELPCLLILCREFLVAGMREFLSQIKVSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PVSRLAKIKTTCQFSALAILLLGSKGSGIHMLDIVGQITLWIAAILTIITGYSYLKVCIK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YF HC >Mature Secondary Structure MQLTRKIPNILTATRISIIPIILITFYFDDVIFSHQLAATLFVIAGITDFFDGYIARKLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHSSFGRMLDHIADKLLVGSILIMIVKFRKAQELPCLLILCREFLVAGMREFLSQIKVSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PVSRLAKIKTTCQFSALAILLLGSKGSGIHMLDIVGQITLWIAAILTIITGYSYLKVCIK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YF HC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA