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The map label for this gene is ybaB [C]

Identifier: 189184646

GI number: 189184646

Start: 1759413

End: 1759973

Strand: Reverse

Name: ybaB [C]

Synonym: OTT_1739

Alternate gene names: 189184646

Gene position: 1759973-1759413 (Counterclockwise)

Preceding gene: 189184647

Following gene: 189184645

Centisome position: 87.6

GC content: 31.55

Gene sequence:

>561_bases
ATGAGAAAATTAAGACAGTTATTAAGACAAGTTGAAGATGCTCAAAAGCAGGTTTCGCAGAAAGAATATAGCGGTAGTGC
TATGATTGAGCACAAGAAAGTAGTTACTGTAATTTTAGATGGGCAGGCAAATGTTAAATCCATTGCTATTGATCTTGCTT
TAACTAGTAACACTACAAGTGAACTATTAGAAAAATTAGTCATAACAGCTTTTAATGATGCTTTTCACCAGATTAATACA
GAAGCATCTAAGATGATGTCAAATATGTTAGGTAAGTTAACTAGTAAACTATCTAAGATGAAGTATCCTCAGCTTGATAA
AATAGATGATAAGGTAGGAAATGCTGAATTTGATGGTAGTGCTGGAGGAAATTTAGTCAACATTATATTGAATGGTAATG
GCAATATTAAATCTATAACAATTGATTCTTCTGTGATTAATGATCAAGCGATGTTAGAAGATTTGCTTGTAGTATCTTAT
TCTAATGCTAAACGTAAATTTGATTCTGAAACTTCTAATGCAATGTCAGATTTGTTAGGTGGAGGCAAATCAGTATTTTG
A

Upstream 100 bases:

>100_bases
AAATGTTTAAAGTTTCTAAAGCATGGGATTTAATTACAACTAATTTTAAAGATGTTGAGGTTGTTGATATTATAATGAAT
AAAAAATAGTTAGGCACTCT

Downstream 100 bases:

>100_bases
TTTAACTAATGAGATTAGGCTTATATAGTAGTTCATTTCACTCTGCTATAATTTGAGTACTTTTGAATTATTAAATCAAA
ATGCTTATTTTGATAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRKLRQLLRQVEDAQKQVSQKEYSGSAMIEHKKVVTVILDGQANVKSIAIDLALTSNTTSELLEKLVITAFNDAFHQINT
EASKMMSNMLGKLTSKLSKMKYPQLDKIDDKVGNAEFDGSAGGNLVNIILNGNGNIKSITIDSSVINDQAMLEDLLVVSY
SNAKRKFDSETSNAMSDLLGGGKSVF

Sequences:

>Translated_186_residues
MRKLRQLLRQVEDAQKQVSQKEYSGSAMIEHKKVVTVILDGQANVKSIAIDLALTSNTTSELLEKLVITAFNDAFHQINT
EASKMMSNMLGKLTSKLSKMKYPQLDKIDDKVGNAEFDGSAGGNLVNIILNGNGNIKSITIDSSVINDQAMLEDLLVVSY
SNAKRKFDSETSNAMSDLLGGGKSVF
>Mature_186_residues
MRKLRQLLRQVEDAQKQVSQKEYSGSAMIEHKKVVTVILDGQANVKSIAIDLALTSNTTSELLEKLVITAFNDAFHQINT
EASKMMSNMLGKLTSKLSKMKYPQLDKIDDKVGNAEFDGSAGGNLVNIILNGNGNIKSITIDSSVINDQAMLEDLLVVSY
SNAKRKFDSETSNAMSDLLGGGKSVF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 20288; Mature: 20288

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLRQLLRQVEDAQKQVSQKEYSGSAMIEHKKVVTVILDGQANVKSIAIDLALTSNTTS
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCCCCEEEEEEEEECCCCHH
ELLEKLVITAFNDAFHQINTEASKMMSNMLGKLTSKLSKMKYPQLDKIDDKVGNAEFDGS
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
AGGNLVNIILNGNGNIKSITIDSSVINDQAMLEDLLVVSYSNAKRKFDSETSNAMSDLLG
CCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHC
GGKSVF
CCCCCC
>Mature Secondary Structure
MRKLRQLLRQVEDAQKQVSQKEYSGSAMIEHKKVVTVILDGQANVKSIAIDLALTSNTTS
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCCCCEEEEEEEEECCCCHH
ELLEKLVITAFNDAFHQINTEASKMMSNMLGKLTSKLSKMKYPQLDKIDDKVGNAEFDGS
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
AGGNLVNIILNGNGNIKSITIDSSVINDQAMLEDLLVVSYSNAKRKFDSETSNAMSDLLG
CCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHC
GGKSVF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]