| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184521
Identifier: 189184521
GI number: 189184521
Start: 1642838
End: 1643377
Strand: Reverse
Name: 189184521
Synonym: OTT_1614
Alternate gene names: NA
Gene position: 1643377-1642838 (Counterclockwise)
Preceding gene: 189184522
Following gene: 189184511
Centisome position: 81.8
GC content: 35.37
Gene sequence:
>540_bases ATGGATTCTGAATACTTATTAATCGATTGGCAAGCAATGCCAGATAGTGAAATAAAAAGAAAAGCAACTGCAGCACTAGT TCATTTTATGAAGTATATTCATAATCAACCGGATGTAATAGAGCTATGGGCAAAATTTTTTGATACACTACAAGAAATAG CACAAAAAGATAAAGCACAGGGCTTTCTTTACATAAAAGCGTTATTGCATTATACTATAAGTAAGGTTAGTAAAAATGAG CAACCTAGGTTAAACCAATTACTGGATGAAAATTTATCAATTGAGGATAGAAAAAGGATTATGGGAACAATTGCTGCGCA ATATATTGATGAAGGCAGGGCTGAAGGTATAGAGATTGGTGAGACTAAAGGCATAGCTAAAGGCAGAGCTAAAGGCAGAG CTAAAGGCAGAGCTAAAGGCAGAGCTGAGGCCGCGCGAGGGCTTGCAATGAACTTATTAAAAGCTGGCTTTTCAGTTGAA TTTATTTCTGAAAATACCGGATTGTCAAAAGAAGAAGTGATTAATTTAAAAAATAACTAG
Upstream 100 bases:
>100_bases AATACTAGAGCTAAAACTTCAATCAATGATTTATTAAGATGCTAGTTTTCCATATTAGTAGAAGTAATAGTTGTTTCTAT ACTGCCATTAAAAAGAATCG
Downstream 100 bases:
>100_bases AGTATTAATTTTTCGAATTAATACTCTACTAACTTAAGTTTTTTGAGCAATTTATATTCACAAACAAAAGCTGTATTTAA GTTTTGTAGCTGCATAGTTA
Product: putative transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MDSEYLLIDWQAMPDSEIKRKATAALVHFMKYIHNQPDVIELWAKFFDTLQEIAQKDKAQGFLYIKALLHYTISKVSKNE QPRLNQLLDENLSIEDRKRIMGTIAAQYIDEGRAEGIEIGETKGIAKGRAKGRAKGRAKGRAEAARGLAMNLLKAGFSVE FISENTGLSKEEVINLKNN
Sequences:
>Translated_179_residues MDSEYLLIDWQAMPDSEIKRKATAALVHFMKYIHNQPDVIELWAKFFDTLQEIAQKDKAQGFLYIKALLHYTISKVSKNE QPRLNQLLDENLSIEDRKRIMGTIAAQYIDEGRAEGIEIGETKGIAKGRAKGRAKGRAKGRAEAARGLAMNLLKAGFSVE FISENTGLSKEEVINLKNN >Mature_179_residues MDSEYLLIDWQAMPDSEIKRKATAALVHFMKYIHNQPDVIELWAKFFDTLQEIAQKDKAQGFLYIKALLHYTISKVSKNE QPRLNQLLDENLSIEDRKRIMGTIAAQYIDEGRAEGIEIGETKGIAKGRAKGRAKGRAKGRAEAARGLAMNLLKAGFSVE FISENTGLSKEEVINLKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20167; Mature: 20167
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSEYLLIDWQAMPDSEIKRKATAALVHFMKYIHNQPDVIELWAKFFDTLQEIAQKDKAQ CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC GFLYIKALLHYTISKVSKNEQPRLNQLLDENLSIEDRKRIMGTIAAQYIDEGRAEGIEIG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC ETKGIAKGRAKGRAKGRAKGRAEAARGLAMNLLKAGFSVEFISENTGLSKEEVINLKNN CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCCC >Mature Secondary Structure MDSEYLLIDWQAMPDSEIKRKATAALVHFMKYIHNQPDVIELWAKFFDTLQEIAQKDKAQ CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC GFLYIKALLHYTISKVSKNEQPRLNQLLDENLSIEDRKRIMGTIAAQYIDEGRAEGIEIG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC ETKGIAKGRAKGRAKGRAKGRAEAARGLAMNLLKAGFSVEFISENTGLSKEEVINLKNN CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA