| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184395
Identifier: 189184395
GI number: 189184395
Start: 1519992
End: 1520327
Strand: Reverse
Name: 189184395
Synonym: OTT_1488
Alternate gene names: NA
Gene position: 1520327-1519992 (Counterclockwise)
Preceding gene: 189184396
Following gene: 189184394
Centisome position: 75.68
GC content: 37.5
Gene sequence:
>336_bases ATGGATTACGTAATATACACATTTGGTGGTGGAGACTTATTGTGGCATGTGTTTAACGGCATAGGAAGAGTCTTTGCTTC AAATAGCGAATACTTCACTCCAGTAGGACACTTAGCCTTGACTATTGGTGGCATATGGGCTGCTACTAGGGCTATTTTTA GAGGAAATATCGGCATTTTTGCTATGGAATGGTTTTTTCCATCGATATTTATTTTTACGCTATTATTTGCTCCCAAAGCT ACTGTTTGGCTGAAGGATGAGGTATCAATGAGTGCGCCAGTGAAGGTTGATAACATTCCTTGTATGATAAAAATAAGTGA AATTGCAATAAAATAA
Upstream 100 bases:
>100_bases TTGCAAATGAGAAATGGACTAGCCTACAAACAGATGCAAATCGAATAGATAAAAGGGCTAGATTAATAGAGCAGCATTTA ATAGCGAAGGAGAAAAGTTA
Downstream 100 bases:
>100_bases AAGATTATAGCAATAGCACAAAAGAAAGCTAGTATACAGTAGCGTTCCTAAGGCTAATAGCCTGTTCTATAGATAAGTAA CTAGCTTTTTTAATTAAAAA
Product: putative conjugative transfer protein TraG
Products: NA
Alternate protein names: Conjugative Transfer Protein
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MDYVIYTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIFAMEWFFPSIFIFTLLFAPKA TVWLKDEVSMSAPVKVDNIPCMIKISEIAIK
Sequences:
>Translated_111_residues MDYVIYTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIFAMEWFFPSIFIFTLLFAPKA TVWLKDEVSMSAPVKVDNIPCMIKISEIAIK >Mature_111_residues MDYVIYTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIFAMEWFFPSIFIFTLLFAPKA TVWLKDEVSMSAPVKVDNIPCMIKISEIAIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12382; Mature: 12382
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYVIYTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIF CCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE AMEWFFPSIFIFTLLFAPKATVWLKDEVSMSAPVKVDNIPCMIKISEIAIK EHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCEEEEEEEEECC >Mature Secondary Structure MDYVIYTFGGGDLLWHVFNGIGRVFASNSEYFTPVGHLALTIGGIWAATRAIFRGNIGIF CCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE AMEWFFPSIFIFTLLFAPKATVWLKDEVSMSAPVKVDNIPCMIKISEIAIK EHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA