Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184349

Identifier: 189184349

GI number: 189184349

Start: 1472662

End: 1474224

Strand: Reverse

Name: 189184349

Synonym: OTT_1442

Alternate gene names: NA

Gene position: 1474224-1472662 (Counterclockwise)

Preceding gene: 189184350

Following gene: 189184348

Centisome position: 73.38

GC content: 32.05

Gene sequence:

>1563_bases
TTGAAAAGTATGGTTGGAATGTCTAATATTAGTCAACGGTATCAGAGACCGCCTAAGACTGACGATTCTCAACAATACAC
TCAACAGCCTGAAAGTGTTAAAATCGCAAAAGTTCAAAACTTGTATGAACTATCAAGTAAGATACATGGTTATGATATAG
ATAAGAACCAACATGCAGAAGTAGTAAACAAGTATCTTGAAAATCGTGGTATTACTTTTGACAAAAGCACTGCAAGTTCA
GACTTAAAAGGAAGTATACTGTTTGATACTCAAACGAGAAAAAATTATCCAGCATTTACAGCATTTGCAAGAAATTCAAA
AGGGGAAATTACCGGAGTACAGGCCATATATCTAAATTTGGCAGGAGATAAGGCGAATATTTCAATTAACAGAAGATCTT
TCGGTAAAATCAGTGGATCGTTCATAACAATCGCAAAGCGAAATGCAAATGACCCTAATATAACAATTATAGCAGAAGGC
GCTGAAACAGCATTGAGCTTGCAGCAATCAGGCATTAAAGGTAATATCATTGCTAGTGCAGGAATTTCGAATTTGAGAAA
TTATTCACCATTTCCTGGTGAAAAAATCATCATTGCAGCAGATAATGATAGCAAAAATCCTATAACTAATAATACTGTAA
TTAAAGCTGCAAAAACGTTAGAAATGAAGGGAGCGATAACTTGTATAGTCAAACCACCAGAAAATGGTGATTTTAATAAT
CTGTTGCAAAGTTGTGGAGACCAGTCAATTAGAGACATTATAGAACCTGAAATTACTAAACTGACTAAGGCAGTTGAAAC
AACAAAACTTACTCAAACAGAAAATAATAGTATAGCAAAACAAAATGATATTACAAATGTTAAAGAATTGTATAATAAAT
CGTCATCTCTATACTATTTAAAACAAGAAGAGGAAGCTAAGGTGGAAGCGATAGTAGTAAACAAATTTTTAGAAAACCAT
ACAGGAATTTATAGTGCAAAAATCTTTAACAATTCTAATTTAAGGGCAAATATGGTTTTTGATGAAGAGACTCAAAAATC
CTGGCCTGCACTCACTATTTTTGTTAAAAATGAAGCAGGTGAAATTACTGGAGCTAAGATATTAACTCTGAATTCAAAAA
CATGTAATAAAGCTGATATTCCAGAAAAATCTGTTGGTACAATTAGTGGCTCATTTGCTGAAATTGCTCAACAAAATTCA
AAATATTCACCTGTAACAATTATTACAAAAGATATTGAAACAGCGTTAACCATTAGGCAAGCTGGAGTAGAAGGAAAAAT
CTTATGTGCAATTGAAGCCGAAAATTTGCAAAACTATAATCCTGGCCCAAAAGAAAAGATCATTCTAGCAGTTAAAAATG
ACGTAAATACTGAAAAAGCTGAAAAAGTTCTAGAGGATAAGGAAGCAGTAGTCTGTACAGTCAAAAATGACTTTAATAAT
GTATTAAAAACTCAAGGATTATATGCTGTTAGAAATATTATCAGCCCTGAAATAAGAAAACTTAATGAAAAAATTGAATC
AATACAAACTAATATACAACAAAGATTATGTCAGAAACACTAG

Upstream 100 bases:

>100_bases
TACGAGAATTAAAGGATCAAATAGCTAGTAGAAAGGTAGTGATTTATTATCCCTGGTTCAAAGAGAAAGAGGATACAGCT
TTTTTGAGGCAAAGGAATAT

Downstream 100 bases:

>100_bases
GCAGAGTATGACACAGCATTTTTTATTTAAAAAACTATAGAGTGAAAAAATATGACAAAAAAATTAAAGCATGATTCATT
GGCAAAGACAATCATGAGTG

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugative Transfer Protein TraA; Conjugal Transfer Protein TraA; MobA/MobL Family Protein

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MKSMVGMSNISQRYQRPPKTDDSQQYTQQPESVKIAKVQNLYELSSKIHGYDIDKNQHAEVVNKYLENRGITFDKSTASS
DLKGSILFDTQTRKNYPAFTAFARNSKGEITGVQAIYLNLAGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEG
AETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNN
LLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENH
TGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNS
KYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNN
VLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQQRLCQKH

Sequences:

>Translated_520_residues
MKSMVGMSNISQRYQRPPKTDDSQQYTQQPESVKIAKVQNLYELSSKIHGYDIDKNQHAEVVNKYLENRGITFDKSTASS
DLKGSILFDTQTRKNYPAFTAFARNSKGEITGVQAIYLNLAGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEG
AETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNN
LLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENH
TGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNS
KYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNN
VLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQQRLCQKH
>Mature_520_residues
MKSMVGMSNISQRYQRPPKTDDSQQYTQQPESVKIAKVQNLYELSSKIHGYDIDKNQHAEVVNKYLENRGITFDKSTASS
DLKGSILFDTQTRKNYPAFTAFARNSKGEITGVQAIYLNLAGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEG
AETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNN
LLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENH
TGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNS
KYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNN
VLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQQRLCQKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57511; Mature: 57511

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMVGMSNISQRYQRPPKTDDSQQYTQQPESVKIAKVQNLYELSSKIHGYDIDKNQHAE
CCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHH
VVNKYLENRGITFDKSTASSDLKGSILFDTQTRKNYPAFTAFARNSKGEITGVQAIYLNL
HHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEEEEE
AGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEGAETALSLQQSGIKGNIIASA
CCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEC
GISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNN
CHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCEEEEEEECCCCCCHHH
LLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYL
HHHHCCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHCCCCCEEEE
KQEEEAKVEAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAG
ECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCC
EITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIRQ
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHH
AGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNN
CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHHH
VLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQQRLCQKH
HHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSMVGMSNISQRYQRPPKTDDSQQYTQQPESVKIAKVQNLYELSSKIHGYDIDKNQHAE
CCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHH
VVNKYLENRGITFDKSTASSDLKGSILFDTQTRKNYPAFTAFARNSKGEITGVQAIYLNL
HHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEEEEE
AGDKANISINRRSFGKISGSFITIAKRNANDPNITIIAEGAETALSLQQSGIKGNIIASA
CCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEC
GISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNN
CHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCEEEEEEECCCCCCHHH
LLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYL
HHHHCCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHCCCCCEEEE
KQEEEAKVEAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAG
ECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCC
EITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIRQ
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHH
AGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNN
CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHHH
VLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQQRLCQKH
HHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA