| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is qorA [H]
Identifier: 189184330
GI number: 189184330
Start: 1457941
End: 1459086
Strand: Reverse
Name: qorA [H]
Synonym: OTT_1423
Alternate gene names: 189184330
Gene position: 1459086-1457941 (Counterclockwise)
Preceding gene: 189184335
Following gene: 189184329
Centisome position: 72.63
GC content: 30.02
Gene sequence:
>1146_bases ATGCATAAACAAAAATTATACCGTATAACTTATGGTAATAGTAATCCAAGTTTTGAATTAGTTGAGGCAGACATTCCTAC TCCAAAAGATGACGAAATACTAATTAAACACACTGCTATCGGAATTAATTTTCAAGATTATGAACATTATAAAAAAACTC TAGTTTCTATATCTAACCCAGTTATAACAAATAATGAGAAATCGTTTGGAGTATACAGCAACATCAAGCAAGCAATTAAG TCTTTTTTACATAATCCTTCTAATCAAGCTACTCATGCTACTCAAGTAAGCAGTGATAATAATATTGCATCAAATAATAC ATTTAGTAATATTGTTACAATCACACCTGGCATAGAAGCAGTAGGTATAGTGCATAAAATAGGAAAATTAGTTAAAGATT TTCAAGTAGGGCAACGAGTTGGCTATTGCACAGTTACAGATGGAGCATATAGCCAATATAGAACAATAAATTCTAACTAT GTTTTTAAAATTCAAGATTCTATATCTGATGAAGCAGCAGCAGCAAATTTAGTCAAAGGAATGACTGCTCATTATTTGAT GAGAAGAACTTTTTATGTACAGCCAAATATGACTATATTAATTCATGCTGCTAGTAGCGCTGTTGGTCAAACAATGCTTA GACTTGCGAAAGAATATAAGGCTACAGCAATAGCTACTGTAGGCAATGACGATCAAGAAAAGAAATCGATTCTTCAAAAT CTTGAATGTGAGTATATATTAAATTATAATAACCCCGATTGGGTAAAGCAAGTAAAAGAAATTACTAATAATAAAGGAGT TAATGTAGTTTATGATTGTTTAGGGCGACAAACTGTTTTAGAATCTATTGACTGCTTAATGCCATTTGGATTAATGGTTC TTTTTGGTCAAATTACAGGTAGAGTTAATATAATTAATCCGCAATTACTAACTCAAAAATCTTTATTTTTTACAATGCCA CAATTACAGTATTATAAACAAGATAATATAGAGCTTTTGCTTAGTGCTCTAGAAGTATTTGCTCTAATAGAAAAGGGAGT ATTACCTAAGAAAGCAAATCAAATTTACCAATTTGATAACATAGTACAAGCAATGCATGATATAGAAAATCATAGAAATT TAGGTACTAAAATTGTACTGTTATAA
Upstream 100 bases:
>100_bases ATAGAAAGCAACAATTTTAAGCACACTATTCTCTAAAATTAAAAATATTTAATTACAAAAAGCAAATTAATAAATTAAAT TTAAATTAAATTTTAATATT
Downstream 100 bases:
>100_bases AACCAATTATTAATCGTTAAAATTATCTTATTAATTGCATATTTTGTTCGCTAATACTTTTTTGGTAATCATTATATAAT CCCATCTTCTCATAGCTAAA
Product: quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MHKQKLYRITYGNSNPSFELVEADIPTPKDDEILIKHTAIGINFQDYEHYKKTLVSISNPVITNNEKSFGVYSNIKQAIK SFLHNPSNQATHATQVSSDNNIASNNTFSNIVTITPGIEAVGIVHKIGKLVKDFQVGQRVGYCTVTDGAYSQYRTINSNY VFKIQDSISDEAAAANLVKGMTAHYLMRRTFYVQPNMTILIHAASSAVGQTMLRLAKEYKATAIATVGNDDQEKKSILQN LECEYILNYNNPDWVKQVKEITNNKGVNVVYDCLGRQTVLESIDCLMPFGLMVLFGQITGRVNIINPQLLTQKSLFFTMP QLQYYKQDNIELLLSALEVFALIEKGVLPKKANQIYQFDNIVQAMHDIENHRNLGTKIVLL
Sequences:
>Translated_381_residues MHKQKLYRITYGNSNPSFELVEADIPTPKDDEILIKHTAIGINFQDYEHYKKTLVSISNPVITNNEKSFGVYSNIKQAIK SFLHNPSNQATHATQVSSDNNIASNNTFSNIVTITPGIEAVGIVHKIGKLVKDFQVGQRVGYCTVTDGAYSQYRTINSNY VFKIQDSISDEAAAANLVKGMTAHYLMRRTFYVQPNMTILIHAASSAVGQTMLRLAKEYKATAIATVGNDDQEKKSILQN LECEYILNYNNPDWVKQVKEITNNKGVNVVYDCLGRQTVLESIDCLMPFGLMVLFGQITGRVNIINPQLLTQKSLFFTMP QLQYYKQDNIELLLSALEVFALIEKGVLPKKANQIYQFDNIVQAMHDIENHRNLGTKIVLL >Mature_381_residues MHKQKLYRITYGNSNPSFELVEADIPTPKDDEILIKHTAIGINFQDYEHYKKTLVSISNPVITNNEKSFGVYSNIKQAIK SFLHNPSNQATHATQVSSDNNIASNNTFSNIVTITPGIEAVGIVHKIGKLVKDFQVGQRVGYCTVTDGAYSQYRTINSNY VFKIQDSISDEAAAANLVKGMTAHYLMRRTFYVQPNMTILIHAASSAVGQTMLRLAKEYKATAIATVGNDDQEKKSILQN LECEYILNYNNPDWVKQVKEITNNKGVNVVYDCLGRQTVLESIDCLMPFGLMVLFGQITGRVNIINPQLLTQKSLFFTMP QLQYYKQDNIELLLSALEVFALIEKGVLPKKANQIYQFDNIVQAMHDIENHRNLGTKIVLL
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI18379349, Length=286, Percent_Identity=25.1748251748252, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI24308257, Length=289, Percent_Identity=25.6055363321799, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI194239674, Length=292, Percent_Identity=22.2602739726027, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI13236495, Length=292, Percent_Identity=22.2602739726027, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI22538446, Length=294, Percent_Identity=25.1700680272109, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI22538444, Length=294, Percent_Identity=25.1700680272109, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI194239676, Length=180, Percent_Identity=22.7777777777778, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI28557745, Length=185, Percent_Identity=27.5675675675676, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790485, Length=267, Percent_Identity=38.2022471910112, Blast_Score=164, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17507255, Length=265, Percent_Identity=21.5094339622642, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=268, Percent_Identity=31.7164179104478, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 42881; Mature: 42881
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKQKLYRITYGNSNPSFELVEADIPTPKDDEILIKHTAIGINFQDYEHYKKTLVSISNP CCCCEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCC VITNNEKSFGVYSNIKQAIKSFLHNPSNQATHATQVSSDNNIASNNTFSNIVTITPGIEA EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCHH VGIVHKIGKLVKDFQVGQRVGYCTVTDGAYSQYRTINSNYVFKIQDSISDEAAAANLVKG HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHEEECCCEEEEECCCCCHHHHHHHHHHH MTAHYLMRRTFYVQPNMTILIHAASSAVGQTMLRLAKEYKATAIATVGNDDQEKKSILQN HHHHHHHHHEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHC LECEYILNYNNPDWVKQVKEITNNKGVNVVYDCLGRQTVLESIDCLMPFGLMVLFGQITG CCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC RVNIINPQLLTQKSLFFTMPQLQYYKQDNIELLLSALEVFALIEKGVLPKKANQIYQFDN EEEEECCHHHHCCHHHEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IVQAMHDIENHRNLGTKIVLL HHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure MHKQKLYRITYGNSNPSFELVEADIPTPKDDEILIKHTAIGINFQDYEHYKKTLVSISNP CCCCEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCC VITNNEKSFGVYSNIKQAIKSFLHNPSNQATHATQVSSDNNIASNNTFSNIVTITPGIEA EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCHH VGIVHKIGKLVKDFQVGQRVGYCTVTDGAYSQYRTINSNYVFKIQDSISDEAAAANLVKG HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHEEECCCEEEEECCCCCHHHHHHHHHHH MTAHYLMRRTFYVQPNMTILIHAASSAVGQTMLRLAKEYKATAIATVGNDDQEKKSILQN HHHHHHHHHEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHC LECEYILNYNNPDWVKQVKEITNNKGVNVVYDCLGRQTVLESIDCLMPFGLMVLFGQITG CCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC RVNIINPQLLTQKSLFFTMPQLQYYKQDNIELLLSALEVFALIEKGVLPKKANQIYQFDN EEEEECCHHHHCCHHHEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IVQAMHDIENHRNLGTKIVLL HHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]