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The map label for this gene is traC [C]

Identifier: 189183659

GI number: 189183659

Start: 779221

End: 780261

Strand: Direct

Name: traC [C]

Synonym: OTT_0752

Alternate gene names: 189183659

Gene position: 779221-780261 (Clockwise)

Preceding gene: 189183658

Following gene: 189183661

Centisome position: 38.79

GC content: 36.12

Gene sequence:

>1041_bases
TTGCTTGCATGCCCATTGGCTGAAGCTAGTGTTTCGGATCAAAATGAAATTGCTGAATTTCTGAAAAGCGATGAAAATTT
ACCTGCTGAAAGTAGCCTGCAAGTCTTAATGATTGGTAGTAATAATATAGAGAATTTTTTAAGCAACTGGCAGTCATATC
GTAAAGGAGAGATATTTATTGAGTTAGCAAATAAAAGAACAGAGTTTTTACGTGATCAAGCTCAAAAAGTATGTTCTATA
AAGGATGTAGTATTGTTGATTTCAGTAACTATACCTAATTTAAATGCAAATATCGATGATATGATTCGCAGAAGAGATGC
TTTAAAAGATACGTTTAGGTCCATAAAAGCTAAGCAATCTGCATCGGCCTTTTGTTCGATGTTAAGACGCAGTGGATGGT
ATTTTGTACCATGCAAATATGATCATGTAGCCGTGTTACTAGCTGCCCTACGAATGCAATTAGTTGAACAAGGCCCAAAA
GGTGTATTGTGTCAAAATAAAACATCAGGAGTTGGAGTAACACTTTCTAACTTAGGTCGAGGCATAAAAACTGTTTCTGT
AGAGAGTAAAGTATTATTACCAATAATCGGTGAATGGAAAGGTGATTTAAGTTCTCCAGGTATGTTGCTAGCTGGCAGAC
GAGGACAAATAATGTATTGGTCACCTTTTGGTGGAGCTTTATTACCTACATTAAATAAGCATGGAATAGCTCCAAATGAG
AACTTTAACCTTTGTATAGCTGGAGTTCCAGGCTCTGGAAAATCTGTTTTCATGCAAGAATTAATGCTATCGGTTCTAGG
AGTTGGTGGTAAAGTTTTTGTTCTTGATTATGGAAGATCATTTAAGCGTACATGCTTGATTTTAGGCGGCAGCTACATAG
AATTTGACATAAAAAATCCTGTATCGATTAATCCATTTTCAGAGGTGCCAGAGAATGACAGTGCAAAGTCTATAGAAGCT
AGATCAGACTTTTTATCTAACTTTTCGTCTATTTTAGCTACTATGGCTGCACCTCAGTATGGAACAAGCGATTTACAATA
A

Upstream 100 bases:

>100_bases
AGGATTTTGATTGAAAAAGATTTTCTAAACATTTTGTCTATGAATCATATGATGATGAGACTCAGCTATTCTTTAATCGT
GGGGTTCAATATGTTTTGTA

Downstream 100 bases:

>100_bases
CCAATGATACAGAGAGCTTTGATATCTGCTATTCTTCCTCATATATAGCATATGCTCCTTCAAGTTCAGCTTCAGCATCA
GCTTCTGCTGTGTCATTATG

Product: putative conjugative transfer protein TraC

Products: NA

Alternate protein names: Type-IV Secretion System Protein TraC; Inner-Membrane Protein TraC; Pilus Biogenesis Protein; Sex Pilus Assembly Protein; Sex Pilus Assembly And Synthesis Protein; Conjugal Transfer Protein TraC; TraC Protein; Sex Pilus Assembly And Synthesis Protein TraC; Conjugative Transfer Protein TraB; ATPase; F-Pilin Subunit Assembly Into Extended F Pili; Type IV Secretory Pathway Protein; Pillus Assembly Protein; Conjugative Transfer Protein; TraC Conjugative Transfer Protein; Type IV Secretory Pathway VirB4 Component; Type IV Conjugative Transfer System Protein TraC

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MLACPLAEASVSDQNEIAEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVCSI
KDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALRMQLVEQGPK
GVLCQNKTSGVGVTLSNLGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGIAPNE
NFNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDIKNPVSINPFSEVPENDSAKSIEA
RSDFLSNFSSILATMAAPQYGTSDLQ

Sequences:

>Translated_346_residues
MLACPLAEASVSDQNEIAEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVCSI
KDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALRMQLVEQGPK
GVLCQNKTSGVGVTLSNLGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGIAPNE
NFNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDIKNPVSINPFSEVPENDSAKSIEA
RSDFLSNFSSILATMAAPQYGTSDLQ
>Mature_346_residues
MLACPLAEASVSDQNEIAEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVCSI
KDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALRMQLVEQGPK
GVLCQNKTSGVGVTLSNLGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGIAPNE
NFNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDIKNPVSINPFSEVPENDSAKSIEA
RSDFLSNFSSILATMAAPQYGTSDLQ

Specific function: Required For The Assembly Of Mature F-Pilin Subunits Into Extended F Pili. [C]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37873; Mature: 37873

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLACPLAEASVSDQNEIAEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFI
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
ELANKRTEFLRDQAQKVCSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIKAKQS
EEHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASAFCSMLRRSGWYFVPCKYDHVAVLLAALRMQLVEQGPKGVLCQNKTSGVGVTLSNLGR
HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEHHHHCC
GIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGIAPNE
CEEEEEECCEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC
NFNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDIKNP
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCEEEEECCCC
VSINPFSEVPENDSAKSIEARSDFLSNFSSILATMAAPQYGTSDLQ
CCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLACPLAEASVSDQNEIAEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFI
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
ELANKRTEFLRDQAQKVCSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIKAKQS
EEHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASAFCSMLRRSGWYFVPCKYDHVAVLLAALRMQLVEQGPKGVLCQNKTSGVGVTLSNLGR
HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEHHHHCC
GIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGIAPNE
CEEEEEECCEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC
NFNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDIKNP
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCEEEEECCCC
VSINPFSEVPENDSAKSIEARSDFLSNFSSILATMAAPQYGTSDLQ
CCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA