| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183603
Identifier: 189183603
GI number: 189183603
Start: 725338
End: 726207
Strand: Direct
Name: 189183603
Synonym: OTT_0696
Alternate gene names: NA
Gene position: 725338-726207 (Clockwise)
Preceding gene: 189183602
Following gene: 189183624
Centisome position: 36.1
GC content: 28.74
Gene sequence:
>870_bases ATGAGATGCTCTTCTTATTGCAAGTCATCTAATTATAGTATTCAAGCTCTTGTACAGAGCTTGGTAAGTGCTGGATTAGA GCCTAAGTATTTTGATGATGTAGTACATGTTCAGACACAATTCACTAATAATTTAGTTGATGTATTCTATTTCGCATTCG GAGCTGTAGTAATTTGGGGAACAAATAAAAACTATGAACACAGTATATTGAACTGGTTAAACAATGTTGATACAGAAATT GATCAAAAATTTATTATAGATGTAGATTCTGTGGTTCAATATAAAGAACTTAGTCAAGATTTTGTATCAGATTTGATATA TTACCGCTATGATTACCAAGCTCAAAAAACTTATATCGATGAAGAAGAAAATGAAATTATACTACATGATCAATCAGTAC TAATCAAACTATCTATTTCACATGCTTTAGCACAATCTGTGAAATTGAAGATATTAGAGTCATCAGTTATAAAACTATTA GAAAAAACATCGCCTTTACAAAAAGAACTAGCTACTAATGGGCGTGTATCTTTGTCAAAAAAAGAATTATCAAAACAAAT AGGTATTTTATTTAATGAGCGTTATTCAATAAATTTACACAGTGATATATTGGATACTCCACAATTTTTTTGGCGCAGAC CTAGATATGAACCACTATACCTTATGACAGTAGAGTTTCAAGATATTCAATTAAGACAAAACATTATGAATCATCGCTTA GATATGATTCATGAATTATATACTATTCTATCAAACGAATTAAACTACTTACATTCAACTAGGTTAGAAATGATTATTGT AGGCTTAATTGCTATAGAGGTAGTATTAGCACTTTTACATAATGATTTTATTTCTAGAATATTTTCTTAA
Upstream 100 bases:
>100_bases ACTTAACCTGCGATATATTTATTGTTGCGGTTTTTATAGCTTGGTAAGCTATAGCACAATGCATTATTAAAGCAAAATTG AAAACAATAAGATTTTTTTA
Downstream 100 bases:
>100_bases ACTGAAAGATAAGATAGTATTTATTGATAAATCTAAAATAGATTTGCCGTGATATCATTAGGATCATTACTATAATAATT GTCTCTTATTTTATAGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MRCSSYCKSSNYSIQALVQSLVSAGLEPKYFDDVVHVQTQFTNNLVDVFYFAFGAVVIWGTNKNYEHSILNWLNNVDTEI DQKFIIDVDSVVQYKELSQDFVSDLIYYRYDYQAQKTYIDEEENEIILHDQSVLIKLSISHALAQSVKLKILESSVIKLL EKTSPLQKELATNGRVSLSKKELSKQIGILFNERYSINLHSDILDTPQFFWRRPRYEPLYLMTVEFQDIQLRQNIMNHRL DMIHELYTILSNELNYLHSTRLEMIIVGLIAIEVVLALLHNDFISRIFS
Sequences:
>Translated_289_residues MRCSSYCKSSNYSIQALVQSLVSAGLEPKYFDDVVHVQTQFTNNLVDVFYFAFGAVVIWGTNKNYEHSILNWLNNVDTEI DQKFIIDVDSVVQYKELSQDFVSDLIYYRYDYQAQKTYIDEEENEIILHDQSVLIKLSISHALAQSVKLKILESSVIKLL EKTSPLQKELATNGRVSLSKKELSKQIGILFNERYSINLHSDILDTPQFFWRRPRYEPLYLMTVEFQDIQLRQNIMNHRL DMIHELYTILSNELNYLHSTRLEMIIVGLIAIEVVLALLHNDFISRIFS >Mature_289_residues MRCSSYCKSSNYSIQALVQSLVSAGLEPKYFDDVVHVQTQFTNNLVDVFYFAFGAVVIWGTNKNYEHSILNWLNNVDTEI DQKFIIDVDSVVQYKELSQDFVSDLIYYRYDYQAQKTYIDEEENEIILHDQSVLIKLSISHALAQSVKLKILESSVIKLL EKTSPLQKELATNGRVSLSKKELSKQIGILFNERYSINLHSDILDTPQFFWRRPRYEPLYLMTVEFQDIQLRQNIMNHRL DMIHELYTILSNELNYLHSTRLEMIIVGLIAIEVVLALLHNDFISRIFS
Specific function: Unknown
COG id: COG1723
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI157388927, Length=291, Percent_Identity=30.2405498281787, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71996861, Length=238, Percent_Identity=28.9915966386555, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320203, Length=311, Percent_Identity=30.5466237942122, Blast_Score=142, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6321163, Length=241, Percent_Identity=30.2904564315353, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320488, Length=294, Percent_Identity=26.530612244898, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI18859701, Length=244, Percent_Identity=29.5081967213115, Blast_Score=110, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33791; Mature: 33791
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCSSYCKSSNYSIQALVQSLVSAGLEPKYFDDVVHVQTQFTNNLVDVFYFAFGAVVIWG CCCHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE TNKNYEHSILNWLNNVDTEIDQKFIIDVDSVVQYKELSQDFVSDLIYYRYDYQAQKTYID CCCCCHHHHHHHHHHCCHHCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC EEENEIILHDQSVLIKLSISHALAQSVKLKILESSVIKLLEKTSPLQKELATNGRVSLSK CCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEHH KELSKQIGILFNERYSINLHSDILDTPQFFWRRPRYEPLYLMTVEFQDIQLRQNIMNHRL HHHHHHHCCEECCCEEEEECHHHHCCCHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHH DMIHELYTILSNELNYLHSTRLEMIIVGLIAIEVVLALLHNDFISRIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRCSSYCKSSNYSIQALVQSLVSAGLEPKYFDDVVHVQTQFTNNLVDVFYFAFGAVVIWG CCCHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE TNKNYEHSILNWLNNVDTEIDQKFIIDVDSVVQYKELSQDFVSDLIYYRYDYQAQKTYID CCCCCHHHHHHHHHHCCHHCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC EEENEIILHDQSVLIKLSISHALAQSVKLKILESSVIKLLEKTSPLQKELATNGRVSLSK CCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEHH KELSKQIGILFNERYSINLHSDILDTPQFFWRRPRYEPLYLMTVEFQDIQLRQNIMNHRL HHHHHHHCCEECCCEEEEECHHHHCCCHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHH DMIHELYTILSNELNYLHSTRLEMIIVGLIAIEVVLALLHNDFISRIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA