| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183583
Identifier: 189183583
GI number: 189183583
Start: 705376
End: 705660
Strand: Direct
Name: 189183583
Synonym: OTT_0676
Alternate gene names: NA
Gene position: 705376-705660 (Clockwise)
Preceding gene: 189183582
Following gene: 189183589
Centisome position: 35.11
GC content: 31.58
Gene sequence:
>285_bases TTGAGCCTTCTGTTATGGTTTCTTATGATGAGAGAATTTGATGAAACTTTGAAATTAGAAAAGCAAATGATGGTTATAAA TTTTACAGCTAGTGCGTCTACTGATAACAAAATACATTGGCACAGTATAAACTTGAAGAAATGTAATAAAGTTGTTAAAA ATCATCGAACTCGTATCGTAAATGCAATACAGGAAAGCAGATGGAATAAAGCAAAAGCTTTGCAATGTTTGCTTACACAT ATTAAACCTGTTCAACAGAAATTGTGCTTAAAGAGGCTTGAGTAA
Upstream 100 bases:
>100_bases CAGTAAGCCTGTATCTTTTCCAATATTGAAGGTGAGATGTAAGGTAAGCTGATGAAGGTGTAAGCAGAGGAAAACAGAAA AAAATGCTCCATACGAAAGT
Downstream 100 bases:
>100_bases TGTGATGCCAAAGCATCACGTACTAGTTGTATATCCAGAGGAGCTAATATGTACAGTGTGAGGTAACCCTACTAGATGAA GAGTTAGAAATCTATAGTTA
Product: reverse transcriptase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIVNAIQESRWNKAKALQCLLTH IKPVQQKLCLKRLE
Sequences:
>Translated_94_residues MSLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIVNAIQESRWNKAKALQCLLTH IKPVQQKLCLKRLE >Mature_93_residues SLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIVNAIQESRWNKAKALQCLLTHI KPVQQKLCLKRLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11206; Mature: 11074
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIV CHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHH NAIQESRWNKAKALQCLLTHIKPVQQKLCLKRLE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIV HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHH NAIQESRWNKAKALQCLLTHIKPVQQKLCLKRLE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA