Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183583

Identifier: 189183583

GI number: 189183583

Start: 705376

End: 705660

Strand: Direct

Name: 189183583

Synonym: OTT_0676

Alternate gene names: NA

Gene position: 705376-705660 (Clockwise)

Preceding gene: 189183582

Following gene: 189183589

Centisome position: 35.11

GC content: 31.58

Gene sequence:

>285_bases
TTGAGCCTTCTGTTATGGTTTCTTATGATGAGAGAATTTGATGAAACTTTGAAATTAGAAAAGCAAATGATGGTTATAAA
TTTTACAGCTAGTGCGTCTACTGATAACAAAATACATTGGCACAGTATAAACTTGAAGAAATGTAATAAAGTTGTTAAAA
ATCATCGAACTCGTATCGTAAATGCAATACAGGAAAGCAGATGGAATAAAGCAAAAGCTTTGCAATGTTTGCTTACACAT
ATTAAACCTGTTCAACAGAAATTGTGCTTAAAGAGGCTTGAGTAA

Upstream 100 bases:

>100_bases
CAGTAAGCCTGTATCTTTTCCAATATTGAAGGTGAGATGTAAGGTAAGCTGATGAAGGTGTAAGCAGAGGAAAACAGAAA
AAAATGCTCCATACGAAAGT

Downstream 100 bases:

>100_bases
TGTGATGCCAAAGCATCACGTACTAGTTGTATATCCAGAGGAGCTAATATGTACAGTGTGAGGTAACCCTACTAGATGAA
GAGTTAGAAATCTATAGTTA

Product: reverse transcriptase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIVNAIQESRWNKAKALQCLLTH
IKPVQQKLCLKRLE

Sequences:

>Translated_94_residues
MSLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIVNAIQESRWNKAKALQCLLTH
IKPVQQKLCLKRLE
>Mature_93_residues
SLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIVNAIQESRWNKAKALQCLLTHI
KPVQQKLCLKRLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11206; Mature: 11074

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIV
CHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHH
NAIQESRWNKAKALQCLLTHIKPVQQKLCLKRLE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLLLWFLMMREFDETLKLEKQMMVINFTASASTDNKIHWHSINLKKCNKVVKNHRTRIV
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHH
NAIQESRWNKAKALQCLLTHIKPVQQKLCLKRLE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA