Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183571

Identifier: 189183571

GI number: 189183571

Start: 693809

End: 694345

Strand: Direct

Name: 189183571

Synonym: OTT_0664

Alternate gene names: NA

Gene position: 693809-694345 (Clockwise)

Preceding gene: 189183570

Following gene: 189183575

Centisome position: 34.54

GC content: 28.31

Gene sequence:

>537_bases
ATGTATAGAAACAATTTGTACCAGGGTTTAGCTAGCAATCTTATATCCACAGACATAGTACAGTTAGCTACTAATTTTAT
ATTCAAAAAAGAAGGTAATAATACTTTAATCTTGATTGGGTGGAATAATAGCAAATACAATGATATTATTCAAAAAGCCC
AAAGTAATTGTAACAGAGAAAAAGAAGCTGTTAGTTATATTTCTTCAAGTATAAAACAGTATGCAGTAGTTGAGCACTAT
GAATATGCTAAAAAAACATATAATATATTATATGCAGTAGAAGAGCTTAATCATAACCAGCTCATACCTATAGTAGTAAA
ATATGATAATGAATCTATTCTAAATAGTAGTAAAAAGTCATTAACTGATAAAGAATTAACTATTGTATGTAATGATTTGA
GTGAGAGACCAGCAGAATTAAATACATTTACTGACGACGACAGAATTGCTTATTATGAAGATAATCTTCGTATTTATACA
CCTGATCAATTTAAAGATTGTTGTATGGGGGACATATCAAATTGTACATCCGAATGA

Upstream 100 bases:

>100_bases
ATCCTGAATTGAAAATATTTAAGCAACAAAAAAGTTATTGCAAATTAGCTAGTATAATTTATAAACTTATAATATAAACT
TACTTAACAATAGGGTGATT

Downstream 100 bases:

>100_bases
TAATATTTTACTAGTTAAACCATATACTAGCTAGCATTAAGTTTGCAATATTCACTTAAGAGTTCTCCAATCTTTGGTAG
ATTAAGGTACTTAGCAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MYRNNLYQGLASNLISTDIVQLATNFIFKKEGNNTLILIGWNNSKYNDIIQKAQSNCNREKEAVSYISSSIKQYAVVEHY
EYAKKTYNILYAVEELNHNQLIPIVVKYDNESILNSSKKSLTDKELTIVCNDLSERPAELNTFTDDDRIAYYEDNLRIYT
PDQFKDCCMGDISNCTSE

Sequences:

>Translated_178_residues
MYRNNLYQGLASNLISTDIVQLATNFIFKKEGNNTLILIGWNNSKYNDIIQKAQSNCNREKEAVSYISSSIKQYAVVEHY
EYAKKTYNILYAVEELNHNQLIPIVVKYDNESILNSSKKSLTDKELTIVCNDLSERPAELNTFTDDDRIAYYEDNLRIYT
PDQFKDCCMGDISNCTSE
>Mature_178_residues
MYRNNLYQGLASNLISTDIVQLATNFIFKKEGNNTLILIGWNNSKYNDIIQKAQSNCNREKEAVSYISSSIKQYAVVEHY
EYAKKTYNILYAVEELNHNQLIPIVVKYDNESILNSSKKSLTDKELTIVCNDLSERPAELNTFTDDDRIAYYEDNLRIYT
PDQFKDCCMGDISNCTSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20543; Mature: 20543

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRNNLYQGLASNLISTDIVQLATNFIFKKEGNNTLILIGWNNSKYNDIIQKAQSNCNRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHCCCHH
KEAVSYISSSIKQYAVVEHYEYAKKTYNILYAVEELNHNQLIPIVVKYDNESILNSSKKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEECCHHHHCCHHHH
LTDKELTIVCNDLSERPAELNTFTDDDRIAYYEDNLRIYTPDQFKDCCMGDISNCTSE
CCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYRNNLYQGLASNLISTDIVQLATNFIFKKEGNNTLILIGWNNSKYNDIIQKAQSNCNRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHCCCHH
KEAVSYISSSIKQYAVVEHYEYAKKTYNILYAVEELNHNQLIPIVVKYDNESILNSSKKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEECCHHHHCCHHHH
LTDKELTIVCNDLSERPAELNTFTDDDRIAYYEDNLRIYTPDQFKDCCMGDISNCTSE
CCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA