| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is piv [H]
Identifier: 189183562
GI number: 189183562
Start: 686199
End: 687161
Strand: Direct
Name: piv [H]
Synonym: OTT_0655
Alternate gene names: 189183562
Gene position: 686199-687161 (Clockwise)
Preceding gene: 189183561
Following gene: 189183566
Centisome position: 34.16
GC content: 32.29
Gene sequence:
>963_bases ATGAATAGTATAATTGTAGGAATTGACGTTTCTAAAGAGACATTTGATGCAGCTGTGTTAATTAATAATAAAGTTCAAAC AAGAAAATTTAATAATAATTCTGAAGGGTTTAACAAATTAGTAACATGGTTAAAAAGCAGAGGAACTGGACATGTTTGTA TGGAAGCAACAGGTATCTACTGGAAAAATTTAGCTAAATATCTGTACGATTATGGTTATAAAGTAAGCGTAGTAAATCCT GCCCGTATTAAAGGTTTTGCAATGAGTAAACTTAGTCGTACAAAAACAGATAAAGCAGACAGTGTATTAATAGCAGATTT TTGCAAAGCAATGAAACCGGAAGCATGGTATCCACAGCCTCTTTATATTCAAGAACTACAGCAGCTAGTTAATCGCCTGA ATGTTTTAATTAAGCATAAAACACAAGAAACAAATAGATTAGAAGGAGCTTCTAAAGCAATTGCTAATAATATTCAAATG CATATTGAATTTCTTGAAACACAAATTAAAGAAATTGAACAACTAATCAATGACCATATTAAAAATAACAAAGATCTTCA TAATAAGGCTATGTTACTTGAGTCAATACCAGGCATAGGAGCAAAAACACAGGCTGTAGTTCTTGCTTTTTTAGCAGATA TTGAGAAATTTAGTTCTGCTAAACAAGTTGTAGCTTTTGTAGGTCTTAATCCTAAGCATCGTCAATCTGGCAGTTCCGTG CGGGGTGCTAGTAGAATCTCTAGAACTGGTAATTCAGATCTACGTAAGTCTTTTTATATGCCTGCTATGTCTGCCTTAAG ACATAATTGTATTATCAAGCAATTTTCTCAACGTTTGTCTGATACTGGCAAACCCAAAATGCTTATCCTTATTGCCGCTA TGCGTAAGTTATTACATATCATTTATGGTGTTTTAAAGCATAATTCTCCTTTTAATCCTAATGTTTTAATCAATCAGAAA TAA
Upstream 100 bases:
>100_bases GTAACTAGCTTTTTTAATTAAAAACCGGACGGTATTCTTAGGCAAAAAGCCTGTATTTACAAGGTTGGTTTTGAGATATT TAACATAAAATTTGGTGATT
Downstream 100 bases:
>100_bases TAATTTTATAAAAACTTACATCTTTTTTATAAAATTATTATTTCTTTTCTTGATTCTTATCACGGTATCTATATGCTTTT TCCTAACAATTTCATCATTC
Product: transposase
Products: NA
Alternate protein names: PIVML [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIYWKNLAKYLYDYGYKVSVVNP ARIKGFAMSKLSRTKTDKADSVLIADFCKAMKPEAWYPQPLYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQM HIEFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAVVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV RGASRISRTGNSDLRKSFYMPAMSALRHNCIIKQFSQRLSDTGKPKMLILIAAMRKLLHIIYGVLKHNSPFNPNVLINQK
Sequences:
>Translated_320_residues MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIYWKNLAKYLYDYGYKVSVVNP ARIKGFAMSKLSRTKTDKADSVLIADFCKAMKPEAWYPQPLYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQM HIEFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAVVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV RGASRISRTGNSDLRKSFYMPAMSALRHNCIIKQFSQRLSDTGKPKMLILIAAMRKLLHIIYGVLKHNSPFNPNVLINQK >Mature_320_residues MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIYWKNLAKYLYDYGYKVSVVNP ARIKGFAMSKLSRTKTDKADSVLIADFCKAMKPEAWYPQPLYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQM HIEFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAVVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV RGASRISRTGNSDLRKSFYMPAMSALRHNCIIKQFSQRLSDTGKPKMLILIAAMRKLLHIIYGVLKHNSPFNPNVLINQK
Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 36086; Mature: 36086
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIY CCCEEEEEECCCHHHCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCHH WKNLAKYLYDYGYKVSVVNPARIKGFAMSKLSRTKTDKADSVLIADFCKAMKPEAWYPQP HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC LYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQMHIEFLETQIKEIEQLINDHI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNNKDLHNKAMLLESIPGIGAKTQAVVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCH RGASRISRTGNSDLRKSFYMPAMSALRHNCIIKQFSQRLSDTGKPKMLILIAAMRKLLHI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IYGVLKHNSPFNPNVLINQK HHHHHHCCCCCCCCEEEECC >Mature Secondary Structure MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNNSEGFNKLVTWLKSRGTGHVCMEATGIY CCCEEEEEECCCHHHCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCHH WKNLAKYLYDYGYKVSVVNPARIKGFAMSKLSRTKTDKADSVLIADFCKAMKPEAWYPQP HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC LYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQMHIEFLETQIKEIEQLINDHI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNNKDLHNKAMLLESIPGIGAKTQAVVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCH RGASRISRTGNSDLRKSFYMPAMSALRHNCIIKQFSQRLSDTGKPKMLILIAAMRKLLHI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IYGVLKHNSPFNPNVLINQK HHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2403542 [H]