| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183485
Identifier: 189183485
GI number: 189183485
Start: 590436
End: 591746
Strand: Direct
Name: 189183485
Synonym: OTT_0578
Alternate gene names: NA
Gene position: 590436-591746 (Clockwise)
Preceding gene: 189183484
Following gene: 189183486
Centisome position: 29.39
GC content: 30.82
Gene sequence:
>1311_bases ATGGCTAAGGGAGAATATATAAGGCATGGTACAGTTTATTTCTTTTTATTTATAATATTCTTCAATACTCAAGCAGTTAC TGCTACTCCATGGATACCTGATGTTAATAAGTATAACATTTTTATTACCTATAGTTCTACAGATTCTAGAGTTACCGAAT CTTGTAGAATGCTGTATGAGCAGCGATCATTGCAAAAAAAGGAAGTATTAGAATATAATCAGGCTCTTCATAAAGGCATT TCATCTCTTTTAAGTGAAGTACAATCTATACATTATAGAATTATAGAAACTCTTAATGAAAAGATACAGTCTCAACGAGC AAATGTTACACTACTACAGCAATGGGAAATATTGATGCTACTTGAAGGTGGTATGTATAGTCCTTTAGGAGAGGAAGGTG TAAGAAAAGCGCAAGAACTAATGATTAAAAAGGCTGATAGCACTCCAACTTCTCAGTTAGCATTTAATGCAATTAATAAC TTACAGCTTACTTTAACTAATCTAGAATCTGCTTTGATTGATCCTATGAATATGTCTGAAGAGCTTAAGCAATCATTAAA GCAAGATTTAAAAAATACTATTAATACTATTCAAGGAATGCCAAATACCAATGTTAAAGATGTAACAACTATTCGTCAGT TAATTGATAAGCTGAAGTTTGAGGTAAAAAAATTAGCTGAGGATAATACTAAATATTATCCTACTAGCACAATATCTATT GCTTTCGAATGCGGCATTTTTTCATGCTTAGCTTTAGGAATAAATTTTCATTACCAAGAAATGCCAGATTTTATTAATGA TATAGCTGGCAAGATTATTGATTTTAAATTATTAGCTAAATGGCAACTATATAAAAGCAACAGAATGCTTATAGCTATTC AGCCTATGTTAGCATTTAAATTTGGTACGGCACAAGAAGCTAAACAGTTCAGCGAACTTTACTTATTAGCAGCTTATATT TATCGTTTACGCTCAATAAAGCTCATACATTTAGTTGAGGTTGGAGGAGCGATTGAATCTATCAGTCAACTGATGAATGA CTATGTATTAAAATGTGGAATTGGTCACGTTGCAGAATTTAAAAATAGTTTCAAAATTATAGCTCAAAGAAATTATTATA TTTATCAAAATAACAAACAGGATCAGAATACCATAATTCATGATCAAATATCTATTGCTCGATCGGTATACAGTAACAAA AAAGATCAATTAGAATTAACAGTCCAGTTTGGCATTTTTGTGGAACGTTATAGAGCATATAAAGGACCTAATAGCAAAGG AATAGTAGTAAGTTTATGGATAAAGAATTAG
Upstream 100 bases:
>100_bases TAGGGGTTATTCAATATTATGCTAACAAGCAGCATAAATTTTATATGAATACTAACGATTCAGATAAATTAAAACATGGG TGGTTTAAACAAATAATGTT
Downstream 100 bases:
>100_bases ATTCATTAGTTATATCAATTGATAATTTCATTTGTAATATTCAAGATGGTGATATAGATAGCTTAGAATCCTTGTTAATT AAAGGCCTAACTACTGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MAKGEYIRHGTVYFFLFIIFFNTQAVTATPWIPDVNKYNIFITYSSTDSRVTESCRMLYEQRSLQKKEVLEYNQALHKGI SSLLSEVQSIHYRIIETLNEKIQSQRANVTLLQQWEILMLLEGGMYSPLGEEGVRKAQELMIKKADSTPTSQLAFNAINN LQLTLTNLESALIDPMNMSEELKQSLKQDLKNTINTIQGMPNTNVKDVTTIRQLIDKLKFEVKKLAEDNTKYYPTSTISI AFECGIFSCLALGINFHYQEMPDFINDIAGKIIDFKLLAKWQLYKSNRMLIAIQPMLAFKFGTAQEAKQFSELYLLAAYI YRLRSIKLIHLVEVGGAIESISQLMNDYVLKCGIGHVAEFKNSFKIIAQRNYYIYQNNKQDQNTIIHDQISIARSVYSNK KDQLELTVQFGIFVERYRAYKGPNSKGIVVSLWIKN
Sequences:
>Translated_436_residues MAKGEYIRHGTVYFFLFIIFFNTQAVTATPWIPDVNKYNIFITYSSTDSRVTESCRMLYEQRSLQKKEVLEYNQALHKGI SSLLSEVQSIHYRIIETLNEKIQSQRANVTLLQQWEILMLLEGGMYSPLGEEGVRKAQELMIKKADSTPTSQLAFNAINN LQLTLTNLESALIDPMNMSEELKQSLKQDLKNTINTIQGMPNTNVKDVTTIRQLIDKLKFEVKKLAEDNTKYYPTSTISI AFECGIFSCLALGINFHYQEMPDFINDIAGKIIDFKLLAKWQLYKSNRMLIAIQPMLAFKFGTAQEAKQFSELYLLAAYI YRLRSIKLIHLVEVGGAIESISQLMNDYVLKCGIGHVAEFKNSFKIIAQRNYYIYQNNKQDQNTIIHDQISIARSVYSNK KDQLELTVQFGIFVERYRAYKGPNSKGIVVSLWIKN >Mature_435_residues AKGEYIRHGTVYFFLFIIFFNTQAVTATPWIPDVNKYNIFITYSSTDSRVTESCRMLYEQRSLQKKEVLEYNQALHKGIS SLLSEVQSIHYRIIETLNEKIQSQRANVTLLQQWEILMLLEGGMYSPLGEEGVRKAQELMIKKADSTPTSQLAFNAINNL QLTLTNLESALIDPMNMSEELKQSLKQDLKNTINTIQGMPNTNVKDVTTIRQLIDKLKFEVKKLAEDNTKYYPTSTISIA FECGIFSCLALGINFHYQEMPDFINDIAGKIIDFKLLAKWQLYKSNRMLIAIQPMLAFKFGTAQEAKQFSELYLLAAYIY RLRSIKLIHLVEVGGAIESISQLMNDYVLKCGIGHVAEFKNSFKIIAQRNYYIYQNNKQDQNTIIHDQISIARSVYSNKK DQLELTVQFGIFVERYRAYKGPNSKGIVVSLWIKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50177; Mature: 50046
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGEYIRHGTVYFFLFIIFFNTQAVTATPWIPDVNKYNIFITYSSTDSRVTESCRMLYE CCCCCEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH QRSLQKKEVLEYNQALHKGISSLLSEVQSIHYRIIETLNEKIQSQRANVTLLQQWEILML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEE LEGGMYSPLGEEGVRKAQELMIKKADSTPTSQLAFNAINNLQLTLTNLESALIDPMNMSE ECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCHHH ELKQSLKQDLKNTINTIQGMPNTNVKDVTTIRQLIDKLKFEVKKLAEDNTKYYPTSTISI HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE AFECGIFSCLALGINFHYQEMPDFINDIAGKIIDFKLLAKWQLYKSNRMLIAIQPMLAFK EEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHC FGTAQEAKQFSELYLLAAYIYRLRSIKLIHLVEVGGAIESISQLMNDYVLKCGIGHVAEF CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHHHHHHHHHCCCCHHHHH KNSFKIIAQRNYYIYQNNKQDQNTIIHDQISIARSVYSNKKDQLELTVQFGIFVERYRAY CCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH KGPNSKGIVVSLWIKN CCCCCCCEEEEEEECC >Mature Secondary Structure AKGEYIRHGTVYFFLFIIFFNTQAVTATPWIPDVNKYNIFITYSSTDSRVTESCRMLYE CCCCEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH QRSLQKKEVLEYNQALHKGISSLLSEVQSIHYRIIETLNEKIQSQRANVTLLQQWEILML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEE LEGGMYSPLGEEGVRKAQELMIKKADSTPTSQLAFNAINNLQLTLTNLESALIDPMNMSE ECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCHHH ELKQSLKQDLKNTINTIQGMPNTNVKDVTTIRQLIDKLKFEVKKLAEDNTKYYPTSTISI HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE AFECGIFSCLALGINFHYQEMPDFINDIAGKIIDFKLLAKWQLYKSNRMLIAIQPMLAFK EEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHC FGTAQEAKQFSELYLLAAYIYRLRSIKLIHLVEVGGAIESISQLMNDYVLKCGIGHVAEF CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHHHHHHHHHCCCCHHHHH KNSFKIIAQRNYYIYQNNKQDQNTIIHDQISIARSVYSNKKDQLELTVQFGIFVERYRAY CCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH KGPNSKGIVVSLWIKN CCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA