Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189183405

Identifier: 189183405

GI number: 189183405

Start: 515568

End: 515780

Strand: Direct

Name: 189183405

Synonym: OTT_0498

Alternate gene names: NA

Gene position: 515568-515780 (Clockwise)

Preceding gene: 189183404

Following gene: 189183406

Centisome position: 25.66

GC content: 27.23

Gene sequence:

>213_bases
ATGAATAGTATAATTGTAGGAATTGACGTTTCTAAAGAAACATTTGATGCAGCTGTGTTAATTAATAATAAAGTTCAAAC
AAGAAAATTTAATAATACTTCTGAATGGTTTAACAAATTAGTAACATTGTTAAAAAGCAGAGGACCTAGATACGTTTGTA
TAAAAGCAACAGGTATCTACTGGAAAAACTTAGCGAAATATTTGTACAATTAG

Upstream 100 bases:

>100_bases
TAACTAGCTTTTTTAACTAAAAACCGGACTGTATTCTTAGGCAAAAAAGCCTGTATTTACAAGGTTGGTTTTCAGATATT
TAACATAAAATTTGGTGATT

Downstream 100 bases:

>100_bases
TAAGCGTAGTAAATCCTGCACGTATTAAAGGTTTTGCAATGAGTAAACTTAGTCGTACAAAAAAACACAGATAAAGCAGA
CAGTGTATTAATAGCATATT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNTSEWFNKLVTLLKSRGPRYVCIKATGIYWKNLAKYLYN

Sequences:

>Translated_70_residues
MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNTSEWFNKLVTLLKSRGPRYVCIKATGIYWKNLAKYLYN
>Mature_70_residues
MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNTSEWFNKLVTLLKSRGPRYVCIKATGIYWKNLAKYLYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8102; Mature: 8102

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNTSEWFNKLVTLLKSRGPRYVCIKATGIY
CCCEEEEEECCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHH
WKNLAKYLYN
HHHHHHHHCC
>Mature Secondary Structure
MNSIIVGIDVSKETFDAAVLINNKVQTRKFNNTSEWFNKLVTLLKSRGPRYVCIKATGIY
CCCEEEEEECCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHH
WKNLAKYLYN
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA