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The map label for this gene is ylbK [H]

Identifier: 189026256

GI number: 189026256

Start: 1127858

End: 1128793

Strand: Reverse

Name: ylbK [H]

Synonym: TPASS_1033

Alternate gene names: 189026256

Gene position: 1128793-1127858 (Counterclockwise)

Preceding gene: 189026258

Following gene: 189026255

Centisome position: 99.06

GC content: 61.75

Gene sequence:

>936_bases
GTGAAGTGGTCGCTCGTTCTTTCAGGTGGTGGTGCGCGGGGAATTGCCCACATTGGGGTGCTCAAGGCGCTTGAAGCGCT
ACAGGTTCCGCCGCCGCAATGTGTCGTAGGATGTTCTATGGGTGCGGTGGTGGGGGCGCTCTATGCGCTGGGGATGTCGG
TGCGGGAGATGGAGGCGTTTTTTCAGCGTGATTTTGTTATTTCAGACTATGTGAATGCACGGGATCCCTCTGCGTGCGTT
GAGGCGGGGATGGTGTGGGGGGCGCGGGCTGCGTTTCAACGCTTGGGCAAGCTGGTGCAGCTGGGGGTGAGTTTGAACAC
GCTCGTGCGGGGGCTGGGGCTTGATTCGGGAGAAAAGTTTGCCACGCTGCTGACGCGGGTGACGGGGGGGAAATCCTTTC
ACGATTGTAAAATTCCGTTTTTGTGCAATGCGGTCAATCTGTGTACGGGCGCGGAGGTTGTGCTCTCCAGTGGGGTGCTT
GCCCGTGCATTGCGCGCCTCGTGTGCGTACCCGGGTGTTTTTGCGCCGGTGCGGCAGGAGGGGGTGTATTTGGCGGACGG
CTGTATATTGAACAACACGCCGGTGTGGATTGCGCGCGCGCAGGGTTTTGACGCGGTGCTGGCGGTGACGTTTGACCGGT
TTGAGCAGCTGGGGCTCAGTGACTTTCGGACGGGGTTTGACGTGTTGCTGCGCAGTCTTTCGTGTGCGTCGCATGCGGTT
GCCACGCAGGCGCGCAATTACCCGAGCGCGTGTGTGCGGGTAGAAACGCGGCGGGACCAGAGTGATTTTTCTCGTCCGCA
GGAGCTGGTGGCGCGTGGGTATGCGGCGGTGCAGCACGCCCGTGCAGTGTTGGACGTATTTTTTGCCCGCGGGGTGCGGG
GGATGCTCGGGCGGCGGCGTCTGGCGCGGCAGGCGCGTGCGTATTTTGAGCGCTAA

Upstream 100 bases:

>100_bases
AAGTGCGCTGCGTACAAACGATTCCATACTGCGTACTGGAACGGTATCACACTGGGGGGAGAATGGACAGCAGGGAGGAA
AACGCTCATAATGACCGCAC

Downstream 100 bases:

>100_bases
CGGGGGGACGCGTGGCCTGCGGCGAGAATGAGCGTGCCTCCACCTCTCCCCCGAATCGGGCGGCTGCCGCGCGCGGCGGA
AGGCTGACGCTGCTGGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKWSLVLSGGGARGIAHIGVLKALEALQVPPPQCVVGCSMGAVVGALYALGMSVREMEAFFQRDFVISDYVNARDPSACV
EAGMVWGARAAFQRLGKLVQLGVSLNTLVRGLGLDSGEKFATLLTRVTGGKSFHDCKIPFLCNAVNLCTGAEVVLSSGVL
ARALRASCAYPGVFAPVRQEGVYLADGCILNNTPVWIARAQGFDAVLAVTFDRFEQLGLSDFRTGFDVLLRSLSCASHAV
ATQARNYPSACVRVETRRDQSDFSRPQELVARGYAAVQHARAVLDVFFARGVRGMLGRRRLARQARAYFER

Sequences:

>Translated_311_residues
MKWSLVLSGGGARGIAHIGVLKALEALQVPPPQCVVGCSMGAVVGALYALGMSVREMEAFFQRDFVISDYVNARDPSACV
EAGMVWGARAAFQRLGKLVQLGVSLNTLVRGLGLDSGEKFATLLTRVTGGKSFHDCKIPFLCNAVNLCTGAEVVLSSGVL
ARALRASCAYPGVFAPVRQEGVYLADGCILNNTPVWIARAQGFDAVLAVTFDRFEQLGLSDFRTGFDVLLRSLSCASHAV
ATQARNYPSACVRVETRRDQSDFSRPQELVARGYAAVQHARAVLDVFFARGVRGMLGRRRLARQARAYFER
>Mature_311_residues
MKWSLVLSGGGARGIAHIGVLKALEALQVPPPQCVVGCSMGAVVGALYALGMSVREMEAFFQRDFVISDYVNARDPSACV
EAGMVWGARAAFQRLGKLVQLGVSLNTLVRGLGLDSGEKFATLLTRVTGGKSFHDCKIPFLCNAVNLCTGAEVVLSSGVL
ARALRASCAYPGVFAPVRQEGVYLADGCILNNTPVWIARAQGFDAVLAVTFDRFEQLGLSDFRTGFDVLLRSLSCASHAV
ATQARNYPSACVRVETRRDQSDFSRPQELVARGYAAVQHARAVLDVFFARGVRGMLGRRRLARQARAYFER

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=261, Percent_Identity=29.5019157088123, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI260656037, Length=221, Percent_Identity=30.316742081448, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI260656041, Length=261, Percent_Identity=29.5019157088123, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI116256487, Length=261, Percent_Identity=29.5019157088123, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI260656043, Length=221, Percent_Identity=30.316742081448, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI148727335, Length=316, Percent_Identity=26.8987341772152, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI148727290, Length=316, Percent_Identity=26.8987341772152, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI226510936, Length=222, Percent_Identity=31.0810810810811, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33569; Mature: 33569

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWSLVLSGGGARGIAHIGVLKALEALQVPPPQCVVGCSMGAVVGALYALGMSVREMEAF
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHH
FQRDFVISDYVNARDPSACVEAGMVWGARAAFQRLGKLVQLGVSLNTLVRGLGLDSGEKF
HHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHH
ATLLTRVTGGKSFHDCKIPFLCNAVNLCTGAEVVLSSGVLARALRASCAYPGVFAPVRQE
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC
GVYLADGCILNNTPVWIARAQGFDAVLAVTFDRFEQLGLSDFRTGFDVLLRSLSCASHAV
CEEEECCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ATQARNYPSACVRVETRRDQSDFSRPQELVARGYAAVQHARAVLDVFFARGVRGMLGRRR
HHHHCCCCHHHEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARQARAYFER
HHHHHHHHHCC
>Mature Secondary Structure
MKWSLVLSGGGARGIAHIGVLKALEALQVPPPQCVVGCSMGAVVGALYALGMSVREMEAF
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHH
FQRDFVISDYVNARDPSACVEAGMVWGARAAFQRLGKLVQLGVSLNTLVRGLGLDSGEKF
HHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHH
ATLLTRVTGGKSFHDCKIPFLCNAVNLCTGAEVVLSSGVLARALRASCAYPGVFAPVRQE
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC
GVYLADGCILNNTPVWIARAQGFDAVLAVTFDRFEQLGLSDFRTGFDVLLRSLSCASHAV
CEEEECCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ATQARNYPSACVRVETRRDQSDFSRPQELVARGYAAVQHARAVLDVFFARGVRGMLGRRR
HHHHCCCCHHHEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARQARAYFER
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]