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The map label for this gene is 189026252

Identifier: 189026252

GI number: 189026252

Start: 1124569

End: 1125255

Strand: Reverse

Name: 189026252

Synonym: TPASS_1029

Alternate gene names: NA

Gene position: 1125255-1124569 (Counterclockwise)

Preceding gene: 189026253

Following gene: 189026251

Centisome position: 98.75

GC content: 61.28

Gene sequence:

>687_bases
ATGTCAAAAATATCCTCCAAAATATCGAGCGTTGATCAAGAAAAATTCCAAGCATTTCTGCAACAAATCCTCAGAAACGT
AAAAACGCAGGAAGACCCCCGCGTGCTCGACGCCTATCGGCGCCTTTTTCGCAAGAGCGTCCCCTTCTCCATGCGCTCAT
ACGTGGCCGCACACCTGGCGCACACGCACTGCCGCGCCGGCGCCACCGCCGGCAGCACGCGGCGCACCGGAGCGCGGGAA
GGTATACGTACCGGCAGCGCGCACGCGCCTTCCTGCGCCAGCGCGCCTGCCAGCGCCGCCCGCGCGCGCGACTTTGAGCG
CAAAGCGCGCGACTACCCCGCCCTCTGCCCGGGGGACACCACGAGCATCTTCATCAGTATTGGAAAAAATCGGCACATCT
ATCCGCGCGACATCATCGCCCTGCTCATGCAGCGCGCCGATGTTGCACGCGAGCACATCGGCACCATCCGCATCCTCGAC
CACTATTCCTTTATCCAAGTCCTTTCGGGTGAGGCAGAAGCGGTTATCGCCCGTTTAAATGGCCTCTTTTACCGGGGGCG
CACCCTGACGGTGAGTCACTCACGCAGGGCGGACGAGCATCCCGCTCCTTCTACAGAGCCGCACGCCGCTGCCGTTGCAC
CAGAGCCTGACTTTATGGCAGAGCCCATCCCCGCCCTGGAAGAATAA

Upstream 100 bases:

>100_bases
ATCGCCCCGTGCGCCGCGCGCTGCAGCGCAGCGCACGTGCCCGTTTTCATGGCACCGCATTATGAGCGCACGAAACGTTT
AAAACTCAGGGAGCGCGAGA

Downstream 100 bases:

>100_bases
GGAACATGCCGTCAGTGCAGGGCGCCGCCCGGGCGCGGTGGCACTCGGTGCGGTGCGGCAGTTTTCGGTTGCAGGGCTGC
GCGTGGAATCCTACCTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSKISSKISSVDQEKFQAFLQQILRNVKTQEDPRVLDAYRRLFRKSVPFSMRSYVAAHLAHTHCRAGATAGSTRRTGARE
GIRTGSAHAPSCASAPASAARARDFERKARDYPALCPGDTTSIFISIGKNRHIYPRDIIALLMQRADVAREHIGTIRILD
HYSFIQVLSGEAEAVIARLNGLFYRGRTLTVSHSRRADEHPAPSTEPHAAAVAPEPDFMAEPIPALEE

Sequences:

>Translated_228_residues
MSKISSKISSVDQEKFQAFLQQILRNVKTQEDPRVLDAYRRLFRKSVPFSMRSYVAAHLAHTHCRAGATAGSTRRTGARE
GIRTGSAHAPSCASAPASAARARDFERKARDYPALCPGDTTSIFISIGKNRHIYPRDIIALLMQRADVAREHIGTIRILD
HYSFIQVLSGEAEAVIARLNGLFYRGRTLTVSHSRRADEHPAPSTEPHAAAVAPEPDFMAEPIPALEE
>Mature_227_residues
SKISSKISSVDQEKFQAFLQQILRNVKTQEDPRVLDAYRRLFRKSVPFSMRSYVAAHLAHTHCRAGATAGSTRRTGAREG
IRTGSAHAPSCASAPASAARARDFERKARDYPALCPGDTTSIFISIGKNRHIYPRDIIALLMQRADVAREHIGTIRILDH
YSFIQVLSGEAEAVIARLNGLFYRGRTLTVSHSRRADEHPAPSTEPHAAAVAPEPDFMAEPIPALEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1029_TREPA (O83992)

Other databases:

- EMBL:   AE000520
- PIR:   H71251
- RefSeq:   NP_219466.1
- ProteinModelPortal:   O83992
- GeneID:   2610904
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP1029
- NMPDR:   fig|243276.1.peg.1024
- TIGR:   TP_1029
- HOGENOM:   HBG731791
- OMA:   FEDSETF
- ProtClustDB:   CLSK218975
- BioCyc:   TPAL243276:TP_1029-MONOMER
- InterPro:   IPR005580

Pfam domain/function: PF03880 DbpA

EC number: NA

Molecular weight: Translated: 25187; Mature: 25056

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKISSKISSVDQEKFQAFLQQILRNVKTQEDPRVLDAYRRLFRKSVPFSMRSYVAAHLA
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
HTHCRAGATAGSTRRTGAREGIRTGSAHAPSCASAPASAARARDFERKARDYPALCPGDT
HHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
TSIFISIGKNRHIYPRDIIALLMQRADVAREHIGTIRILDHYSFIQVLSGEAEAVIARLN
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHCCCHHHHHHHHH
GLFYRGRTLTVSHSRRADEHPAPSTEPHAAAVAPEPDFMAEPIPALEE
HHEECCCEEEECCCCCCCCCCCCCCCCCCEECCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
SKISSKISSVDQEKFQAFLQQILRNVKTQEDPRVLDAYRRLFRKSVPFSMRSYVAAHLA
CHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
HTHCRAGATAGSTRRTGAREGIRTGSAHAPSCASAPASAARARDFERKARDYPALCPGDT
HHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
TSIFISIGKNRHIYPRDIIALLMQRADVAREHIGTIRILDHYSFIQVLSGEAEAVIARLN
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHCCCHHHHHHHHH
GLFYRGRTLTVSHSRRADEHPAPSTEPHAAAVAPEPDFMAEPIPALEE
HHEECCCEEEECCCCCCCCCCCCCCCCCCEECCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876