Click here to switch to the map view.

The map label for this gene is 189026178

Identifier: 189026178

GI number: 189026178

Start: 1038089

End: 1038361

Strand: Reverse

Name: 189026178

Synonym: TPASS_0955

Alternate gene names: NA

Gene position: 1038361-1038089 (Counterclockwise)

Preceding gene: 189026182

Following gene: 189026177

Centisome position: 91.13

GC content: 53.85

Gene sequence:

>273_bases
TTGACGGGGGTTCCCACGCCCATCCTGATTATTCCCATCCATGAGATAAAGAGTTTCCAGAACCGCCTCGATATCCGAGA
CGCTGCACGTTGGATCGCGCTGGCGACGGTGCTCGAGCGCGCTCAATTCTTCCTCAAAAACTTCACGATATTTGAGCTCT
TCCCAGGACTCCCCGCACGCCATCGGCGGAAGCATAAGCTGATTTTCCCTCTCAGGTCAAGGGCATGGCTCTTGTGGGGG
AGCTCCAGGAAAGTTCCTCTGCGATTTAAATAA

Upstream 100 bases:

>100_bases
TTCATTTCTTTTCCATGCTCAGGGGCGAGGCAGTGCTCAGCTGGCGTCTCCACTCGCACAGAAACTGCTCGTACGCGGCT
ATGGTAGCGTCCAGACCGAT

Downstream 100 bases:

>100_bases
AAAGGTAAAAGAAAGACGCCGAGAATTCAGCGACGCGCGGGTGTCGGCAGCGTGCGGTACAGGGGGTCGGTGTGCGGTAT
GGCACTCTTTTTAAGGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MTGVPTPILIIPIHEIKSFQNRLDIRDAARWIALATVLERAQFFLKNFTIFELFPGLPARHRRKHKLIFPLRSRAWLLWG
SSRKVPLRFK

Sequences:

>Translated_90_residues
MTGVPTPILIIPIHEIKSFQNRLDIRDAARWIALATVLERAQFFLKNFTIFELFPGLPARHRRKHKLIFPLRSRAWLLWG
SSRKVPLRFK
>Mature_89_residues
TGVPTPILIIPIHEIKSFQNRLDIRDAARWIALATVLERAQFFLKNFTIFELFPGLPARHRRKHKLIFPLRSRAWLLWGS
SRKVPLRFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y955_TREPA (O83921)

Other databases:

- EMBL:   AE000520
- PIR:   A71262
- RefSeq:   NP_219392.1
- ProteinModelPortal:   O83921
- IntAct:   O83921
- GeneID:   2611587
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0955
- NMPDR:   fig|243276.1.peg.950
- TIGR:   TP_0955
- HOGENOM:   HBG732175
- ProtClustDB:   CLSK2300341
- BioCyc:   TPAL243276:TP_0955-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10661; Mature: 10530

Theoretical pI: Translated: 12.44; Mature: 12.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGVPTPILIIPIHEIKSFQNRLDIRDAARWIALATVLERAQFFLKNFTIFELFPGLPAR
CCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
HRRKHKLIFPLRSRAWLLWGSSRKVPLRFK
CCCCCCEEEECCCCEEEEECCCCCCCEEEC
>Mature Secondary Structure 
TGVPTPILIIPIHEIKSFQNRLDIRDAARWIALATVLERAQFFLKNFTIFELFPGLPAR
CCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
HRRKHKLIFPLRSRAWLLWGSSRKVPLRFK
CCCCCCEEEECCCCEEEEECCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876