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The map label for this gene is 189026165

Identifier: 189026165

GI number: 189026165

Start: 1026165

End: 1026629

Strand: Reverse

Name: 189026165

Synonym: TPASS_0942

Alternate gene names: NA

Gene position: 1026629-1026165 (Counterclockwise)

Preceding gene: 189026166

Following gene: 189026164

Centisome position: 90.1

GC content: 56.34

Gene sequence:

>465_bases
ATGGACGGTGCGCGGGTATCAGACGAAGAGGTAGCGCGTCGGGTTGCGACTCTCAAGCGCTTGAAGGCACTGCTGCAGGA
GCAGCGGGAAAAGTTTGCGCAGTATTTGGTGGTGTTGCAGCAGCAACAGGTAGCCATTGAGGCGCAGGACGCAGAGACGG
TGTTGCGTCATGTGGAACTTGAAGAAGCGTTGCTTGGAGATGTTCAGCGTGTGCAAAAGGCGTTGGCTCCGATGGAACAG
CTGTGTCTGCAGCAGGCGTCTGGTGTGCAGGAGCTTGCGCAGTTACGGTGTGATCTGTCTCGAGTACAGGAGCAGGTATA
TGCGCAGAATGAAAAAAACCGAGCCCTCCTCCGTGCGCAGGTCAGCGATTTGCGCCAGCAGCTCGATGAATTTCGTGCGG
CGCGTGGGCTGGTGAGCTATGAGGACGGGGAGGACTCAGGGACGGTAATTGATCTGAGTTTATAA

Upstream 100 bases:

>100_bases
AGTTGCGCGAGGCGTGGTTTCAAATTGTCAGGAGTCCTGCATCCTCCGTTACTTCTGCGTCGCCTGCTTCATATAACGTG
AACCTTGCGGGGTAGGGTGC

Downstream 100 bases:

>100_bases
GCGCTTTTGCCAGACCATCTCAGGGGAGGAGGTGCGGCAAGCTGGATTTTTCCAGTCGGTTGTGTGACAATGCGCTGTGG
AACCCGCTGTTATTTTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDGARVSDEEVARRVATLKRLKALLQEQREKFAQYLVVLQQQQVAIEAQDAETVLRHVELEEALLGDVQRVQKALAPMEQ
LCLQQASGVQELAQLRCDLSRVQEQVYAQNEKNRALLRAQVSDLRQQLDEFRAARGLVSYEDGEDSGTVIDLSL

Sequences:

>Translated_154_residues
MDGARVSDEEVARRVATLKRLKALLQEQREKFAQYLVVLQQQQVAIEAQDAETVLRHVELEEALLGDVQRVQKALAPMEQ
LCLQQASGVQELAQLRCDLSRVQEQVYAQNEKNRALLRAQVSDLRQQLDEFRAARGLVSYEDGEDSGTVIDLSL
>Mature_154_residues
MDGARVSDEEVARRVATLKRLKALLQEQREKFAQYLVVLQQQQVAIEAQDAETVLRHVELEEALLGDVQRVQKALAPMEQ
LCLQQASGVQELAQLRCDLSRVQEQVYAQNEKNRALLRAQVSDLRQQLDEFRAARGLVSYEDGEDSGTVIDLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y942_TREPA (O83912)

Other databases:

- EMBL:   AE000520
- PIR:   B71263
- RefSeq:   NP_219378.1
- ProteinModelPortal:   O83912
- IntAct:   O83912
- GeneID:   2611482
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0942
- NMPDR:   fig|243276.1.peg.936
- TIGR:   TP_0942
- HOGENOM:   HBG251095
- OMA:   TQERSIN
- ProtClustDB:   CLSK218937
- BioCyc:   TPAL243276:TP_0942-MONOMER
- GO:   GO:0019861
- InterPro:   IPR007809

Pfam domain/function: PF05130 FlgN

EC number: NA

Molecular weight: Translated: 17418; Mature: 17418

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGARVSDEEVARRVATLKRLKALLQEQREKFAQYLVVLQQQQVAIEAQDAETVLRHVEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEALLGDVQRVQKALAPMEQLCLQQASGVQELAQLRCDLSRVQEQVYAQNEKNRALLRAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VSDLRQQLDEFRAARGLVSYEDGEDSGTVIDLSL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MDGARVSDEEVARRVATLKRLKALLQEQREKFAQYLVVLQQQQVAIEAQDAETVLRHVEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEALLGDVQRVQKALAPMEQLCLQQASGVQELAQLRCDLSRVQEQVYAQNEKNRALLRAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VSDLRQQLDEFRAARGLVSYEDGEDSGTVIDLSL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876