Click here to switch to the map view.

The map label for this gene is 189026102

Identifier: 189026102

GI number: 189026102

Start: 957171

End: 958652

Strand: Reverse

Name: 189026102

Synonym: TPASS_0879

Alternate gene names: NA

Gene position: 958652-957171 (Counterclockwise)

Preceding gene: 189026103

Following gene: 189026101

Centisome position: 84.13

GC content: 43.45

Gene sequence:

>1482_bases
GTGAGCAGAAAACATCATATACCCTGTACCGTGATGATTCTGAATATAATGATGAGCGTGTTTGTGACGTTCTGTACACC
TGTCCGGTGTGATTTAACAGCACAGAGAGCATATTCCCTTTCGGCACACACCATTAAGCTTTTTGAGAGTGTCGAAAGTA
CTGTGGAAATAACGTGGTTTTATTCCACCGATGTAGATAGGTACATTCCTACCGTCATATATGTGAGAGATTTGCTTAAA
GAGTACGCTCATCAGCTGAGTAAGCAGTGTGCAGTAGCGATGAAGGATATTAATCTCCTTTCTCAGTCTTTGAGGAAAGA
ACTTGGATTTGTTGCTCGGCGCGTTACGTATACGCGTAACACTGCCAGCATAGCGTACGATGCGTATTCTGCAATACTTG
TTGAATATCGTGGTATGGCTCGTGCCGTACCCTTTGTGTCTGACACCAAAAGGCTGGAGTATGACATCGCGCGTTTGATC
ATCCAGATGCAGCAGGAAATGAGTGCAGATATGATGTCCCGTGGGATATATGTTCTTGCTCCACCAGAAAGTTTAAGTAC
CACATATGCCCATGTATTACCGCGTTTGCAATCTGAAGGATTGCTCCCAGAGATTCTCTCTATTTCTTTGCCTCAGCTAG
ATACCCGTATTCCACTTTTGATTTTAGGTTCTGGCTACGTGGATGAACACGCCGTAACCTTACTTGATGCTTTTTTGCAG
AAGGGAGGAAACGCATTGTGCTTTGTATCAGGAAATAGCGTGCAACTCAATGATCAATGGACTGTTGAGGAAAAGCGCCA
TGATTTTCTTATTAATCTCCTGAGCACGTACGGAATTACTATTAACTCAGATCTCATTCTCGACGAGCAAAGTTTTGCTG
TATCGTTACCTTCAGTTTACGAAACTCAATACGATAGAGTGTCTTATCCGTTCTGGCCAGTTGTTACTTTGAAACCGTAT
ACGCACGGAGTACCTGTAATGGTACAAGCGGGAATTCAGTTCCTTCGATTATTTTGGCCCTCGTCAATACGAGTTTCTTT
TCCTGCCCGTGTATTTGAGTCTACGAGTAATCATTCTCTGTGTATGACTGCGCCTTTTAATATTGATCCTTCTGTTGATC
ACCTGAAAGATCTTGCAAAAGGTAAAATGCCCGCTCCCCAGGCATTTGTTGCATTTCGTGATTACCCTGGAAAGCTCATG
GTAGTGTCCGATGAGTACATGGTCAGTGCAATTGTGGAACATACGCACAACGGAGAAAATCTTGATTTCATGATAAACTG
TATTCAGTGGCTGTGTGGTAACGATGGTTTACTTATGCTGAAAAGCAAGAATCCCGCGTGGCTTCCATTGAAATCTTTCC
GTGATGAACAAAAGTTCGCACGCATTGTGCACCGTGCGCGCTATCTGAATATCGTAGCTATCCCTGTGCTTATAGGAATG
CTGTTTGTGGTGATGCAGATTCTTTATCGGAGAAAACGGTGA

Upstream 100 bases:

>100_bases
CCGCTCGTGGCATATTCGATTTAAGCGATTTCGCGTTCTATATTTTTGTAGCGATAGCGGGTATCGAGTTGCAGTGTTTG
ATTGTAAGGGTTCGTTTTAG

Downstream 100 bases:

>100_bases
GGGTTATGCGATCTGTGGATTCGCGTAGCAGCGTAACACGGTGGGTATGTTTAACCTCAGTGATTTTGTTTTGCTTTTGT
ATTGCGGTGATGAGGTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MSRKHHIPCTVMILNIMMSVFVTFCTPVRCDLTAQRAYSLSAHTIKLFESVESTVEITWFYSTDVDRYIPTVIYVRDLLK
EYAHQLSKQCAVAMKDINLLSQSLRKELGFVARRVTYTRNTASIAYDAYSAILVEYRGMARAVPFVSDTKRLEYDIARLI
IQMQQEMSADMMSRGIYVLAPPESLSTTYAHVLPRLQSEGLLPEILSISLPQLDTRIPLLILGSGYVDEHAVTLLDAFLQ
KGGNALCFVSGNSVQLNDQWTVEEKRHDFLINLLSTYGITINSDLILDEQSFAVSLPSVYETQYDRVSYPFWPVVTLKPY
THGVPVMVQAGIQFLRLFWPSSIRVSFPARVFESTSNHSLCMTAPFNIDPSVDHLKDLAKGKMPAPQAFVAFRDYPGKLM
VVSDEYMVSAIVEHTHNGENLDFMINCIQWLCGNDGLLMLKSKNPAWLPLKSFRDEQKFARIVHRARYLNIVAIPVLIGM
LFVVMQILYRRKR

Sequences:

>Translated_493_residues
MSRKHHIPCTVMILNIMMSVFVTFCTPVRCDLTAQRAYSLSAHTIKLFESVESTVEITWFYSTDVDRYIPTVIYVRDLLK
EYAHQLSKQCAVAMKDINLLSQSLRKELGFVARRVTYTRNTASIAYDAYSAILVEYRGMARAVPFVSDTKRLEYDIARLI
IQMQQEMSADMMSRGIYVLAPPESLSTTYAHVLPRLQSEGLLPEILSISLPQLDTRIPLLILGSGYVDEHAVTLLDAFLQ
KGGNALCFVSGNSVQLNDQWTVEEKRHDFLINLLSTYGITINSDLILDEQSFAVSLPSVYETQYDRVSYPFWPVVTLKPY
THGVPVMVQAGIQFLRLFWPSSIRVSFPARVFESTSNHSLCMTAPFNIDPSVDHLKDLAKGKMPAPQAFVAFRDYPGKLM
VVSDEYMVSAIVEHTHNGENLDFMINCIQWLCGNDGLLMLKSKNPAWLPLKSFRDEQKFARIVHRARYLNIVAIPVLIGM
LFVVMQILYRRKR
>Mature_492_residues
SRKHHIPCTVMILNIMMSVFVTFCTPVRCDLTAQRAYSLSAHTIKLFESVESTVEITWFYSTDVDRYIPTVIYVRDLLKE
YAHQLSKQCAVAMKDINLLSQSLRKELGFVARRVTYTRNTASIAYDAYSAILVEYRGMARAVPFVSDTKRLEYDIARLII
QMQQEMSADMMSRGIYVLAPPESLSTTYAHVLPRLQSEGLLPEILSISLPQLDTRIPLLILGSGYVDEHAVTLLDAFLQK
GGNALCFVSGNSVQLNDQWTVEEKRHDFLINLLSTYGITINSDLILDEQSFAVSLPSVYETQYDRVSYPFWPVVTLKPYT
HGVPVMVQAGIQFLRLFWPSSIRVSFPARVFESTSNHSLCMTAPFNIDPSVDHLKDLAKGKMPAPQAFVAFRDYPGKLMV
VSDEYMVSAIVEHTHNGENLDFMINCIQWLCGNDGLLMLKSKNPAWLPLKSFRDEQKFARIVHRARYLNIVAIPVLIGML
FVVMQILYRRKR

Specific function: Unknown

COG id: COG3225

COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56139; Mature: 56008

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKHHIPCTVMILNIMMSVFVTFCTPVRCDLTAQRAYSLSAHTIKLFESVESTVEITWF
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCHHHHHHHHHHCCEEEEEEE
YSTDVDRYIPTVIYVRDLLKEYAHQLSKQCAVAMKDINLLSQSLRKELGFVARRVTYTRN
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
TASIAYDAYSAILVEYRGMARAVPFVSDTKRLEYDIARLIIQMQQEMSADMMSRGIYVLA
CHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
PPESLSTTYAHVLPRLQSEGLLPEILSISLPQLDTRIPLLILGSGYVDEHAVTLLDAFLQ
CCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
KGGNALCFVSGNSVQLNDQWTVEEKRHDFLINLLSTYGITINSDLILDEQSFAVSLPSVY
CCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCEEECCCEEECCCHHEEECCHHH
ETQYDRVSYPFWPVVTLKPYTHGVPVMVQAGIQFLRLFWPSSIRVSFPARVFESTSNHSL
HCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCE
CMTAPFNIDPSVDHLKDLAKGKMPAPQAFVAFRDYPGKLMVVSDEYMVSAIVEHTHNGEN
EEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECHHHHHHHHHHCCCCCC
LDFMINCIQWLCGNDGLLMLKSKNPAWLPLKSFRDEQKFARIVHRARYLNIVAIPVLIGM
HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFVVMQILYRRKR
HHHHHHHHHHCCC
>Mature Secondary Structure 
SRKHHIPCTVMILNIMMSVFVTFCTPVRCDLTAQRAYSLSAHTIKLFESVESTVEITWF
CCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCHHHHHHHHHHCCEEEEEEE
YSTDVDRYIPTVIYVRDLLKEYAHQLSKQCAVAMKDINLLSQSLRKELGFVARRVTYTRN
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
TASIAYDAYSAILVEYRGMARAVPFVSDTKRLEYDIARLIIQMQQEMSADMMSRGIYVLA
CHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
PPESLSTTYAHVLPRLQSEGLLPEILSISLPQLDTRIPLLILGSGYVDEHAVTLLDAFLQ
CCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
KGGNALCFVSGNSVQLNDQWTVEEKRHDFLINLLSTYGITINSDLILDEQSFAVSLPSVY
CCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCEEECCCEEECCCHHEEECCHHH
ETQYDRVSYPFWPVVTLKPYTHGVPVMVQAGIQFLRLFWPSSIRVSFPARVFESTSNHSL
HCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCE
CMTAPFNIDPSVDHLKDLAKGKMPAPQAFVAFRDYPGKLMVVSDEYMVSAIVEHTHNGEN
EEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECHHHHHHHHHHCCCCCC
LDFMINCIQWLCGNDGLLMLKSKNPAWLPLKSFRDEQKFARIVHRARYLNIVAIPVLIGM
HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFVVMQILYRRKR
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA