Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189026070
Identifier: 189026070
GI number: 189026070
Start: 919878
End: 920204
Strand: Reverse
Name: 189026070
Synonym: TPASS_0846
Alternate gene names: NA
Gene position: 920204-919878 (Counterclockwise)
Preceding gene: 189026071
Following gene: 189026069
Centisome position: 80.76
GC content: 53.82
Gene sequence:
>327_bases GTGGTCAGTGTAAAGGGGCAGTTGCACATCGATCTGTTGGGAGCGTCTTTTTCCATCCAGGCTGACGAGGACTCCTCGTA TCTGCGTGTGTTGTATGAGCATTACAAGATGGTGGTGTTGCAGGTGGAGAAGACGTCAGGGGTCCGCGATCCCTTAAAGG TCGCGGTGATTGCGGGTGTGCTTCTCGCGGATGAACTGCATAAAGAGAAGAGGAGACGTCTTGTACAGTCCGAGGAAGAT CTGCTGGAAATAGGGGAGTCTACCGAGCGTATGCTCGAATCCATCAGCAAAGTGGTGGACGAGGGGTTTGTGTGCGGGCG CGATTGA
Upstream 100 bases:
>100_bases GAGAAGCGCTTACGCAACACGCGGCGAAGGTTCTAGAAAACCGGGAGCATGCGGGGCTGTCTGAAGAACTTACCAGCCGT ACCCAGATGGAAATTTTTTA
Downstream 100 bases:
>100_bases GGGTTGTGTCCTTCTTTGTGTACGGGACGTCCCTGCGGTGACGCTGTGGGTGGACGCGGACTCATGCCCCGCGCGCGTCC GCGTACTTGTCGCGAGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MVSVKGQLHIDLLGASFSIQADEDSSYLRVLYEHYKMVVLQVEKTSGVRDPLKVAVIAGVLLADELHKEKRRRLVQSEED LLEIGESTERMLESISKVVDEGFVCGRD
Sequences:
>Translated_108_residues MVSVKGQLHIDLLGASFSIQADEDSSYLRVLYEHYKMVVLQVEKTSGVRDPLKVAVIAGVLLADELHKEKRRRLVQSEED LLEIGESTERMLESISKVVDEGFVCGRD >Mature_108_residues MVSVKGQLHIDLLGASFSIQADEDSSYLRVLYEHYKMVVLQVEKTSGVRDPLKVAVIAGVLLADELHKEKRRRLVQSEED LLEIGESTERMLESISKVVDEGFVCGRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y846_TREPA (O83818)
Other databases:
- EMBL: AE000520 - PIR: F71273 - RefSeq: NP_219282.1 - ProteinModelPortal: O83818 - IntAct: O83818 - GeneID: 2611016 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0846 - NMPDR: fig|243276.1.peg.841 - TIGR: TP_0846 - HOGENOM: HBG732127 - OMA: ANETDEY - ProtClustDB: CLSK218894 - BioCyc: TPAL243276:TP_0846-MONOMER - InterPro: IPR007838
Pfam domain/function: PF05164 ZapA; SSF102829 Cell-division_prot_ZapA-like
EC number: NA
Molecular weight: Translated: 12146; Mature: 12146
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVKGQLHIDLLGASFSIQADEDSSYLRVLYEHYKMVVLQVEKTSGVRDPLKVAVIAGV CCCCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHH LLADELHKEKRRRLVQSEEDLLEIGESTERMLESISKVVDEGFVCGRD HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVSVKGQLHIDLLGASFSIQADEDSSYLRVLYEHYKMVVLQVEKTSGVRDPLKVAVIAGV CCCCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHH LLADELHKEKRRRLVQSEEDLLEIGESTERMLESISKVVDEGFVCGRD HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876