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The map label for this gene is cbpA [C]

Identifier: 189026067

GI number: 189026067

Start: 917283

End: 918107

Strand: Reverse

Name: cbpA [C]

Synonym: TPASS_0843

Alternate gene names: 189026067

Gene position: 918107-917283 (Counterclockwise)

Preceding gene: 189026069

Following gene: 189026066

Centisome position: 80.57

GC content: 54.67

Gene sequence:

>825_bases
TTGCATTTTTCTATGTGCCCAGATACCATGGCCTCGCCTTGGAAGGTCTGGCCTCTAGTGGAAGATTATTACCGCGTGCT
TGGTGTGTCGCACCGTGCCTCGACCCCTGAAATTAAGTGTGCCTTCAGAAAGAAGGCAAAGGCGTTACATCCGGATCTCG
TTTCCCATACTGCAGAACTTGAGTGCGAGGCGGTAGCGCGCGAGCGCGCTCTTCGCCGTATACTCACCGCATACGAGGTG
CTCTCTGATCCGGGGCGTCGCGCGAAATTTGACCTCCTCTACGCGCGTTTCTGCGCACGTCCTGCTCCAGCGGGCTTTGA
CTACCGCGTGTACCTGCGTGCGCAGGGTACGCTCTGCGCGATGGTGGAGCTTATCTTGTTTGATCTCTTTCACGGTTTTG
AGTGTGACGCTGTCCGCGCGTACTTGTCCCTCAAGTGTCGGCCAGAAGGGTTCAACCTCGCCACTCACCTTACACGAGAG
GATTTTATGGACTGTGGCTTTGTGCTCGCAGAGGAATTGCATGTACGGGGAGAGTGCTATGAATGCTTTACTTTGCTCCA
GGACATCGTTTTTGAAGAATTGCGGTGCGCGTATTTTCGTCATTTTTTTCCTGAAGTACTGAAGCTCGCTGAGCATATCG
CGCTCGGTACTGCGTCTGTGCGTGGTCGCAACGGTAAATCCTGCGTATACTGCGCGCGCGCGCATGCCTGCTTGCCTGCG
CAAGAAATTGTCACCTTCTACGCGTGCTTAGTTGAGTATTACGAACGTACGGGAGACCGCAGGCGTGCGCGTGGCTATGC
CCAGAAGATGGATTCTGTCAGGTGA

Upstream 100 bases:

>100_bases
ACTCTCATTTGCCCAACCTCCTCTAAAAAGAGCACACATCCCGCGCAACGCTATCTGAAAAAAGATCGGCACGTCAATCC
CTCTTTGCTGTAGGGCTCCC

Downstream 100 bases:

>100_bases
ATGTTTGACTGCACCCTGGCGGAGGAGTACCGTGGTCCTGGGGGACCTCCGAAGGGCTGGAGGTCCCCCTGCAGCTAGTG
AACGGACAGAGGAGGGACGC

Product: heat shock protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MHFSMCPDTMASPWKVWPLVEDYYRVLGVSHRASTPEIKCAFRKKAKALHPDLVSHTAELECEAVARERALRRILTAYEV
LSDPGRRAKFDLLYARFCARPAPAGFDYRVYLRAQGTLCAMVELILFDLFHGFECDAVRAYLSLKCRPEGFNLATHLTRE
DFMDCGFVLAEELHVRGECYECFTLLQDIVFEELRCAYFRHFFPEVLKLAEHIALGTASVRGRNGKSCVYCARAHACLPA
QEIVTFYACLVEYYERTGDRRRARGYAQKMDSVR

Sequences:

>Translated_274_residues
MHFSMCPDTMASPWKVWPLVEDYYRVLGVSHRASTPEIKCAFRKKAKALHPDLVSHTAELECEAVARERALRRILTAYEV
LSDPGRRAKFDLLYARFCARPAPAGFDYRVYLRAQGTLCAMVELILFDLFHGFECDAVRAYLSLKCRPEGFNLATHLTRE
DFMDCGFVLAEELHVRGECYECFTLLQDIVFEELRCAYFRHFFPEVLKLAEHIALGTASVRGRNGKSCVYCARAHACLPA
QEIVTFYACLVEYYERTGDRRRARGYAQKMDSVR
>Mature_274_residues
MHFSMCPDTMASPWKVWPLVEDYYRVLGVSHRASTPEIKCAFRKKAKALHPDLVSHTAELECEAVARERALRRILTAYEV
LSDPGRRAKFDLLYARFCARPAPAGFDYRVYLRAQGTLCAMVELILFDLFHGFECDAVRAYLSLKCRPEGFNLATHLTRE
DFMDCGFVLAEELHVRGECYECFTLLQDIVFEELRCAYFRHFFPEVLKLAEHIALGTASVRGRNGKSCVYCARAHACLPA
QEIVTFYACLVEYYERTGDRRRARGYAQKMDSVR

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31527; Mature: 31527

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFSMCPDTMASPWKVWPLVEDYYRVLGVSHRASTPEIKCAFRKKAKALHPDLVSHTAEL
CCCCCCCHHHCCCCEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
ECEAVARERALRRILTAYEVLSDPGRRAKFDLLYARFCARPAPAGFDYRVYLRAQGTLCA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHH
MVELILFDLFHGFECDAVRAYLSLKCRPEGFNLATHLTREDFMDCGFVLAEELHVRGECY
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ECFTLLQDIVFEELRCAYFRHFFPEVLKLAEHIALGTASVRGRNGKSCVYCARAHACLPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEHHHHHCCCH
QEIVTFYACLVEYYERTGDRRRARGYAQKMDSVR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHFSMCPDTMASPWKVWPLVEDYYRVLGVSHRASTPEIKCAFRKKAKALHPDLVSHTAEL
CCCCCCCHHHCCCCEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
ECEAVARERALRRILTAYEVLSDPGRRAKFDLLYARFCARPAPAGFDYRVYLRAQGTLCA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHH
MVELILFDLFHGFECDAVRAYLSLKCRPEGFNLATHLTREDFMDCGFVLAEELHVRGECY
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ECFTLLQDIVFEELRCAYFRHFFPEVLKLAEHIALGTASVRGRNGKSCVYCARAHACLPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEHHHHHCCCH
QEIVTFYACLVEYYERTGDRRRARGYAQKMDSVR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA