Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189026008
Identifier: 189026008
GI number: 189026008
Start: 850828
End: 851961
Strand: Reverse
Name: 189026008
Synonym: TPASS_0783
Alternate gene names: NA
Gene position: 851961-850828 (Counterclockwise)
Preceding gene: 189026012
Following gene: 189026007
Centisome position: 74.77
GC content: 51.86
Gene sequence:
>1134_bases TTGAAAGAGATCGCGCGCCATTGTACGTTCTCCCCTATGAAGATTAAAGAGAAAAAAGGCTATTTCATCTCTTTTTCCGC TCTATTTTTGATTGCCTATATGTTCGTAGCAGCCGTCCCCCTCGGGGCTGACCCTTACTTTTTGCCTATTTGGGCACGTG ACCTTGCATCTGAATTGCACKAAGAGCGTCCTGAGCGCGCGGTGCGCGTGAACGCTGACACAGTGCAGACCCTCCAACCT TTCATGGTGGGGGAGTACTTTGGCTATTTTACCGATSAGGGGTCGGTTGTGTTTGCCACGCGGGTTACCCAGCGCCTTTC TGCTTCTACACACGCATGGGCGGTGTATCCTGAGCATGCAGTGCGCACGCCTGTTTTTAACCCTGCTGGGGAACACCTTG CAGAAATTGCTGAGCCAGGCTTTGTGCATATTGAAGCGGATCGCTTTTTTCTCTTTTCCCCAGGGGGAAATGCTGTTTCC TCCTATGACGCGCGCGGTGTACAACGGTGGCGTGTGTTGCACACGGCGCCTATAACCGCGTTTCACTCTTCTGCTGCAGG CGCGGTTATCGGGTTTTCTGATGGGAAGGTGATGGTTGTACGTGCCGACGGCACCGTCAGATGTGCATTCTATCCGGGCG GGAGCACATATGAAATTGTGTTTGGGGTGACTCTCTCTGCAGATGGCACACTTGCTGCGTGCGTGTGTGGTTTGGACAGG CAGCGCGTTATCCTGGTGTCTCTTGCGGATGTGCAGTGCAAGATTGTTCACCATCAATATTTGGAGGGCGCGTTACGTCA CCAGCTTTTGATGAATTTTGATACCGAAGGGCGCTATGTGGTATTTGAACATGCACAAGGGGTAGGGGTGATTGATTGCC AAAGGTTAGAGACAAACATTATCCCCCTGGTTGGGGATGTTGTTGGTATGGGCGTGCAGCCTGAGTGCGATGTTGTGACG GTGTTAAGCCAGAAGGAGCAGCGGTGTCGGTTTGCTGTTTTTGAGCGCGCGGTGCATAGGGTGGGGGATGTGCGGTTTGA CGCACAGGATGTGTCATTGACTCAGGGTGAAAAAAAATTCTTTCTAAGTATCGATATGCTTCTTGCACGCATTGACATTG CAGGGATCCCGTAA
Upstream 100 bases:
>100_bases CAACGCGTCCCAAGTAGGAAAGAAGGACGCACCTTAAAAGCAACAACCCCGCCCCCACAGCCGCGAAGCACAACAAACCT CGCAAGAAGGGCGAACGAAC
Downstream 100 bases:
>100_bases GGGGTAGGGACAGAGGGGGTGTGCCGGCGTGCGTACGATTTTTGTGGGTGTACTGTTGCTCGCGATTATGGGAGAAGGGC GCTTGTGTGCGTTGGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKEIARHCTFSPMKIKEKKGYFISFSALFLIAYMFVAAVPLGADPYFLPIWARDLASELHXERPERAVRVNADTVQTLQP FMVGEYFGYFTDZGSVVFATRVTQRLSASTHAWAVYPEHAVRTPVFNPAGEHLAEIAEPGFVHIEADRFFLFSPGGNAVS SYDARGVQRWRVLHTAPITAFHSSAAGAVIGFSDGKVMVVRADGTVRCAFYPGGSTYEIVFGVTLSADGTLAACVCGLDR QRVILVSLADVQCKIVHHQYLEGALRHQLLMNFDTEGRYVVFEHAQGVGVIDCQRLETNIIPLVGDVVGMGVQPECDVVT VLSQKEQRCRFAVFERAVHRVGDVRFDAQDVSLTQGEKKFFLSIDMLLARIDIAGIP
Sequences:
>Translated_377_residues MKEIARHCTFSPMKIKEKKGYFISFSALFLIAYMFVAAVPLGADPYFLPIWARDLASELHXERPERAVRVNADTVQTLQP FMVGEYFGYFTDZGSVVFATRVTQRLSASTHAWAVYPEHAVRTPVFNPAGEHLAEIAEPGFVHIEADRFFLFSPGGNAVS SYDARGVQRWRVLHTAPITAFHSSAAGAVIGFSDGKVMVVRADGTVRCAFYPGGSTYEIVFGVTLSADGTLAACVCGLDR QRVILVSLADVQCKIVHHQYLEGALRHQLLMNFDTEGRYVVFEHAQGVGVIDCQRLETNIIPLVGDVVGMGVQPECDVVT VLSQKEQRCRFAVFERAVHRVGDVRFDAQDVSLTQGEKKFFLSIDMLLARIDIAGIP >Mature_377_residues MKEIARHCTFSPMKIKEKKGYFISFSALFLIAYMFVAAVPLGADPYFLPIWARDLASELHXERPERAVRVNADTVQTLQP FMVGEYFGYFTDZGSVVFATRVTQRLSASTHAWAVYPEHAVRTPVFNPAGEHLAEIAEPGFVHIEADRFFLFSPGGNAVS SYDARGVQRWRVLHTAPITAFHSSAAGAVIGFSDGKVMVVRADGTVRCAFYPGGSTYEIVFGVTLSADGTLAACVCGLDR QRVILVSLADVQCKIVHHQYLEGALRHQLLMNFDTEGRYVVFEHAQGVGVIDCQRLETNIIPLVGDVVGMGVQPECDVVT VLSQKEQRCRFAVFERAVHRVGDVRFDAQDVSLTQGEKKFFLSIDMLLARIDIAGIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y783_TREPA (O83762)
Other databases:
- EMBL: AE000520 - PIR: H71282 - RefSeq: NP_219220.1 - ProteinModelPortal: O83762 - GeneID: 2611195 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0783 - NMPDR: fig|243276.1.peg.779 - TIGR: TP_0783 - HOGENOM: HBG732105 - OMA: ENAFLIQ - ProtClustDB: CLSK218866 - BioCyc: TPAL243276:TP_0783-MONOMER - InterPro: IPR015943 - Gene3D: G3DSA:2.130.10.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41626; Mature: 41626
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x215ad614)-;
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIARHCTFSPMKIKEKKGYFISFSALFLIAYMFVAAVPLGADPYFLPIWARDLASELH CCCHHHHCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH XERPERAVRVNADTVQTLQPFMVGEYFGYFTDZGSVVFATRVTQRLSASTHAWAVYPEHA CCCCCCEEEECCHHHHHHHHHHHHHHHCEEECCCCEEEEEHHHHHHCCCCCEEEECCCCH VRTPVFNPAGEHLAEIAEPGFVHIEADRFFLFSPGGNAVSSYDARGVQRWRVLHTAPITA HCCCCCCCCHHHHHHHCCCCEEEEEECEEEEECCCCCCCCCCCCCCHHHEEEEEECCCCE FHSSAAGAVIGFSDGKVMVVRADGTVRCAFYPGGSTYEIVFGVTLSADGTLAACVCGLDR ECCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCEEEEEEEEEECCCCCCEEEEECCCC QRVILVSLADVQCKIVHHQYLEGALRHQLLMNFDTEGRYVVFEHAQGVGVIDCQRLETNI CEEEEEEECCCEEEEHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCEEEHHHCCCCC IPLVGDVVGMGVQPECDVVTVLSQKEQRCRFAVFERAVHRVGDVRFDAQDVSLTQGEKKF CEEHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEECCCCCEECCCCCEE FLSIDMLLARIDIAGIP EEEHHHHHHHHCCCCCH >Mature Secondary Structure MKEIARHCTFSPMKIKEKKGYFISFSALFLIAYMFVAAVPLGADPYFLPIWARDLASELH CCCHHHHCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH XERPERAVRVNADTVQTLQPFMVGEYFGYFTDZGSVVFATRVTQRLSASTHAWAVYPEHA CCCCCCEEEECCHHHHHHHHHHHHHHHCEEECCCCEEEEEHHHHHHCCCCCEEEECCCCH VRTPVFNPAGEHLAEIAEPGFVHIEADRFFLFSPGGNAVSSYDARGVQRWRVLHTAPITA HCCCCCCCCHHHHHHHCCCCEEEEEECEEEEECCCCCCCCCCCCCCHHHEEEEEECCCCE FHSSAAGAVIGFSDGKVMVVRADGTVRCAFYPGGSTYEIVFGVTLSADGTLAACVCGLDR ECCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCEEEEEEEEEECCCCCCEEEEECCCC QRVILVSLADVQCKIVHHQYLEGALRHQLLMNFDTEGRYVVFEHAQGVGVIDCQRLETNI CEEEEEEECCCEEEEHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCEEEHHHCCCCC IPLVGDVVGMGVQPECDVVTVLSQKEQRCRFAVFERAVHRVGDVRFDAQDVSLTQGEKKF CEEHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEECCCCCEECCCCCEE FLSIDMLLARIDIAGIP EEEHHHHHHHHCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876