Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189025988
Identifier: 189025988
GI number: 189025988
Start: 827763
End: 828704
Strand: Reverse
Name: 189025988
Synonym: TPASS_0763
Alternate gene names: NA
Gene position: 828704-827763 (Counterclockwise)
Preceding gene: 189025990
Following gene: 189025983
Centisome position: 72.73
GC content: 53.93
Gene sequence:
>942_bases GTGGGTTTCCTCGGGTATATCTACAATTGCATACGTATTCACGTTTCGCTCGCCCCCATAGTAGAATGGCGCCCCGCACA GGCGGGGAGGCAGTATAGGAGATTTCCCATGAAGATCAAAGCATTAGTAGTGCTTTTTAACGGTGCACTCCTGCTGCTGT GTATGGGTACCGGATATGTTCTGTTTCTCACTCCTGTCCGGGGTACAGGCTGGCAATCTGTGCGCGCGTATGGGATTTTT TTTCTCATTTTTCTCCTACTCTTTTTGCTGATAAATACACTCTATGTTAAAAACAGGAGACTGCTTCGATACCTGGATGC GGAAGATTGGTCGGCATTGGCAGCTCTTTTGGAGGAGGAAGTGTTCACCCGCAATAGGGTTGCCTTGCGGAGGGTGTCTC TCCTTTCAGAGTCACTGATCCTTTTAAGTGACTTTGAAGCACTTGAGCGACTAGAACATTTTGTGCACGCGCAGCGCCCT CGGTATATCATGAAGTGCGCGCTCACCTTTGCCGTTGGCAAGCTCCTTGCGGGAAAGTACTCGGAGCTGCGTACCTTTAT GACGCGCGTTGCCGCCACACAGGCGCCCGTCCAGCCGTGGACTCGCTTTTACCTCGCATTCGCGTGTCACCTGTGCGGCG ACTTTGAACAGGCACACGCGCATCTTCTCACGTTGGTGCACACCAAGCGTCAGCCGTTGATTCGCGTACTCAGTGCATAC CTTCTGTCAGAAGTGCTTCCTGAAAAACTTAGGCGCGCCCCCGCGCACGACGCCCAGCTGATTGCGCGCGGCTGTGCGCA TGCAGCACAGGTGAGGGCAGACGTCCATGCACACTACACGCCCCGCCGCTGGGCGGACTACGAGAATCGCAAGAAGCAAA ACGTAGACGTCTTGGTGTTTCTAAAACTGATGCAGGACGCACGCGCTTGGCTCTTTCCCTGA
Upstream 100 bases:
>100_bases TGAAGTCCCACTCCTGCAGTCGACTCTTTAGCGCTTCGTCAAAGAGACCTGCGGGGGTCAGCACTAAAAAAGTGTCATCA AGATACACGTCATCGCTGAA
Downstream 100 bases:
>100_bases AAGGGGGAACGCACGGGCCCTGCCCCTGCGCCCCACACACGTCTTTGAGTGGCCCCGGATGTCAGGCCTCGCGCCACTCC CCCTCCTCCTCGGTATAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MGFLGYIYNCIRIHVSLAPIVEWRPAQAGRQYRRFPMKIKALVVLFNGALLLLCMGTGYVLFLTPVRGTGWQSVRAYGIF FLIFLLLFLLINTLYVKNRRLLRYLDAEDWSALAALLEEEVFTRNRVALRRVSLLSESLILLSDFEALERLEHFVHAQRP RYIMKCALTFAVGKLLAGKYSELRTFMTRVAATQAPVQPWTRFYLAFACHLCGDFEQAHAHLLTLVHTKRQPLIRVLSAY LLSEVLPEKLRRAPAHDAQLIARGCAHAAQVRADVHAHYTPRRWADYENRKKQNVDVLVFLKLMQDARAWLFP
Sequences:
>Translated_313_residues MGFLGYIYNCIRIHVSLAPIVEWRPAQAGRQYRRFPMKIKALVVLFNGALLLLCMGTGYVLFLTPVRGTGWQSVRAYGIF FLIFLLLFLLINTLYVKNRRLLRYLDAEDWSALAALLEEEVFTRNRVALRRVSLLSESLILLSDFEALERLEHFVHAQRP RYIMKCALTFAVGKLLAGKYSELRTFMTRVAATQAPVQPWTRFYLAFACHLCGDFEQAHAHLLTLVHTKRQPLIRVLSAY LLSEVLPEKLRRAPAHDAQLIARGCAHAAQVRADVHAHYTPRRWADYENRKKQNVDVLVFLKLMQDARAWLFP >Mature_312_residues GFLGYIYNCIRIHVSLAPIVEWRPAQAGRQYRRFPMKIKALVVLFNGALLLLCMGTGYVLFLTPVRGTGWQSVRAYGIFF LIFLLLFLLINTLYVKNRRLLRYLDAEDWSALAALLEEEVFTRNRVALRRVSLLSESLILLSDFEALERLEHFVHAQRPR YIMKCALTFAVGKLLAGKYSELRTFMTRVAATQAPVQPWTRFYLAFACHLCGDFEQAHAHLLTLVHTKRQPLIRVLSAYL LSEVLPEKLRRAPAHDAQLIARGCAHAAQVRADVHAHYTPRRWADYENRKKQNVDVLVFLKLMQDARAWLFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y763_TREPA (O83744)
Other databases:
- EMBL: AE000520 - PIR: F71285 - RefSeq: NP_219200.1 - ProteinModelPortal: O83744 - IntAct: O83744 - GeneID: 2611368 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0763 - NMPDR: fig|243276.1.peg.759 - TIGR: TP_0763 - HOGENOM: HBG732097 - OMA: TASEWIV - ProtClustDB: CLSK218852 - BioCyc: TPAL243276:TP_0763-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36156; Mature: 36025
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x216cae0c)-; HASH(0x2163bcd0)-;
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLGYIYNCIRIHVSLAPIVEWRPAQAGRQYRRFPMKIKALVVLFNGALLLLCMGTGYV CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEE LFLTPVRGTGWQSVRAYGIFFLIFLLLFLLINTLYVKNRRLLRYLDAEDWSALAALLEEE EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VFTRNRVALRRVSLLSESLILLSDFEALERLEHFVHAQRPRYIMKCALTFAVGKLLAGKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH SELRTFMTRVAATQAPVQPWTRFYLAFACHLCGDFEQAHAHLLTLVHTKRQPLIRVLSAY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH LLSEVLPEKLRRAPAHDAQLIARGCAHAAQVRADVHAHYTPRRWADYENRKKQNVDVLVF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCHHHHH LKLMQDARAWLFP HHHHHHHHHHCCH >Mature Secondary Structure GFLGYIYNCIRIHVSLAPIVEWRPAQAGRQYRRFPMKIKALVVLFNGALLLLCMGTGYV CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEE LFLTPVRGTGWQSVRAYGIFFLIFLLLFLLINTLYVKNRRLLRYLDAEDWSALAALLEEE EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VFTRNRVALRRVSLLSESLILLSDFEALERLEHFVHAQRPRYIMKCALTFAVGKLLAGKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH SELRTFMTRVAATQAPVQPWTRFYLAFACHLCGDFEQAHAHLLTLVHTKRQPLIRVLSAY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH LLSEVLPEKLRRAPAHDAQLIARGCAHAAQVRADVHAHYTPRRWADYENRKKQNVDVLVF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCHHHHH LKLMQDARAWLFP HHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876