Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189025977
Identifier: 189025977
GI number: 189025977
Start: 818120
End: 819262
Strand: Reverse
Name: 189025977
Synonym: TPASS_0752
Alternate gene names: NA
Gene position: 819262-818120 (Counterclockwise)
Preceding gene: 189025978
Following gene: 189025974
Centisome position: 71.9
GC content: 54.59
Gene sequence:
>1143_bases GTGCAGTTTTTGTCCGATACACAGCGCATGGTGCTGTCGCGCGCGGTGTGCGCGTCCTTTTTCTTCTTCCACGTAGCAGT TGCCGCGTATACGGCGCGTGTCCAGGAAATGGCGATGCGTGGTTTTGCATTGCGCAATTTTCAGCAGGTGCATGCGTATT TTGAGCAGCATATTCCGTTGCTTTCTTCGTTTACGGAGAAAAAGGAAGCGCTCTCGCTCTTTGCTCAGTATTTAGAATTG CACGATGCTCATGAGCGTGCGGCACATCGTTACCGAGATGCGGCGTTGTATGCGCTGGGTACTGAGCGCGTGCAGTTCTT ACTTGAAGCTACGCGTAATGCAATGGCCGCGGATGCGCGCGAGTATGCACGGGAAACGTTGGCAGAAGTCGAGCACATAG GTGTGCAGGTGCTAAACAAGAAACAGCATGCTACGTTCTTGGTTTATCACGTGTGGCTTGCGCTCCATGCGGCGTCTACG GCCGCGCATCTCCATGAGCAGTTGGAAAGATTGGAAGAGTATGGCACGCAGGGTGTGTTCAATGTGTTTGAGACGGTGTT GCTGTTTACTCGTTGGTGGATTACTCAGGATGAGAAGGTGGCACAGCGTCTGACAGAGAGGTATCCGCAAAGCTTTGAAG CACTTTCGGTTATAGGGGCGGTGGAAATAGCGCCGTCGGTTTTTTGGCATTTGATGCCGCGTGCGTACGGAGAAGCAGTT GAATCAATGGGAAAATCTGAGACAGTTGTCTTGCAGGACGCGAAGCTACGTCCTGTACCCGAGGTGGTGGCAGCGCACAG GACCCGTCGCGCGCACGTGGCCGCAGACGGCACGGCTGCGCGGTCTGCTATGTCGTCGTCCCATAATTTGGGCGTGTCGA TTCTCGAGGGAGGGGTATCTGTGCCCGATGAGGTGGGCGCGGGAGATGAGAAGCCACGGGGGTACCAGCTCGGGTTTTTT CGAGCAAAGGAAAATGCGCAACGGCTGATGGACGATCTGGAGAGGCGTGGTTTTGGGTTCCAGCTGCATACGGTCCGACG TGCAGACGCGGTGTACTACCAAGTTTTTGTGCCGGAGGATGATTCCGGCTTTGTTGGTCACCGACTAAAAGATGCAGGAT ACGAGACGTTTCCCCTATTCTAG
Upstream 100 bases:
>100_bases AGCATGTGGACGTTCCCTAGCCAGACTGCAATGACACAAAGTCGCGTCTAGGGCTCGCAGGACGGCGCGCGTGTGCGTGT TTGGGTTCTCTGCTTAATGC
Downstream 100 bases:
>100_bases GGGGCCGGCACACATCGGTGTTTTAGAATGAGTTCCTGTATAAGGTGGTGCATAAACGCGTGGGGAAGCTGTGGATATGG GGATAGCGTGGGGAAAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MQFLSDTQRMVLSRAVCASFFFFHVAVAAYTARVQEMAMRGFALRNFQQVHAYFEQHIPLLSSFTEKKEALSLFAQYLEL HDAHERAAHRYRDAALYALGTERVQFLLEATRNAMAADAREYARETLAEVEHIGVQVLNKKQHATFLVYHVWLALHAAST AAHLHEQLERLEEYGTQGVFNVFETVLLFTRWWITQDEKVAQRLTERYPQSFEALSVIGAVEIAPSVFWHLMPRAYGEAV ESMGKSETVVLQDAKLRPVPEVVAAHRTRRAHVAADGTAARSAMSSSHNLGVSILEGGVSVPDEVGAGDEKPRGYQLGFF RAKENAQRLMDDLERRGFGFQLHTVRRADAVYYQVFVPEDDSGFVGHRLKDAGYETFPLF
Sequences:
>Translated_380_residues MQFLSDTQRMVLSRAVCASFFFFHVAVAAYTARVQEMAMRGFALRNFQQVHAYFEQHIPLLSSFTEKKEALSLFAQYLEL HDAHERAAHRYRDAALYALGTERVQFLLEATRNAMAADAREYARETLAEVEHIGVQVLNKKQHATFLVYHVWLALHAAST AAHLHEQLERLEEYGTQGVFNVFETVLLFTRWWITQDEKVAQRLTERYPQSFEALSVIGAVEIAPSVFWHLMPRAYGEAV ESMGKSETVVLQDAKLRPVPEVVAAHRTRRAHVAADGTAARSAMSSSHNLGVSILEGGVSVPDEVGAGDEKPRGYQLGFF RAKENAQRLMDDLERRGFGFQLHTVRRADAVYYQVFVPEDDSGFVGHRLKDAGYETFPLF >Mature_380_residues MQFLSDTQRMVLSRAVCASFFFFHVAVAAYTARVQEMAMRGFALRNFQQVHAYFEQHIPLLSSFTEKKEALSLFAQYLEL HDAHERAAHRYRDAALYALGTERVQFLLEATRNAMAADAREYARETLAEVEHIGVQVLNKKQHATFLVYHVWLALHAAST AAHLHEQLERLEEYGTQGVFNVFETVLLFTRWWITQDEKVAQRLTERYPQSFEALSVIGAVEIAPSVFWHLMPRAYGEAV ESMGKSETVVLQDAKLRPVPEVVAAHRTRRAHVAADGTAARSAMSSSHNLGVSILEGGVSVPDEVGAGDEKPRGYQLGFF RAKENAQRLMDDLERRGFGFQLHTVRRADAVYYQVFVPEDDSGFVGHRLKDAGYETFPLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y752_TREPA (O83733)
Other databases:
- EMBL: AE000520 - PIR: C71284 - RefSeq: NP_219189.1 - ProteinModelPortal: O83733 - IntAct: O83733 - GeneID: 2611131 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0752 - NMPDR: fig|243276.1.peg.748 - TIGR: TP_0752 - HOGENOM: HBG732092 - OMA: LADNISE - ProtClustDB: CLSK218848 - BioCyc: TPAL243276:TP_0752-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43043; Mature: 43043
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLSDTQRMVLSRAVCASFFFFHVAVAAYTARVQEMAMRGFALRNFQQVHAYFEQHIPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LSSFTEKKEALSLFAQYLELHDAHERAAHRYRDAALYALGTERVQFLLEATRNAMAADAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYARETLAEVEHIGVQVLNKKQHATFLVYHVWLALHAASTAAHLHEQLERLEEYGTQGVF HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH NVFETVLLFTRWWITQDEKVAQRLTERYPQSFEALSVIGAVEIAPSVFWHLMPRAYGEAV HHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESMGKSETVVLQDAKLRPVPEVVAAHRTRRAHVAADGTAARSAMSSSHNLGVSILEGGVS HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHEECCCCC VPDEVGAGDEKPRGYQLGFFRAKENAQRLMDDLERRGFGFQLHTVRRADAVYYQVFVPED CCHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEHHHHCCEEEEEEEECCC DSGFVGHRLKDAGYETFPLF CCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MQFLSDTQRMVLSRAVCASFFFFHVAVAAYTARVQEMAMRGFALRNFQQVHAYFEQHIPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LSSFTEKKEALSLFAQYLELHDAHERAAHRYRDAALYALGTERVQFLLEATRNAMAADAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYARETLAEVEHIGVQVLNKKQHATFLVYHVWLALHAASTAAHLHEQLERLEEYGTQGVF HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH NVFETVLLFTRWWITQDEKVAQRLTERYPQSFEALSVIGAVEIAPSVFWHLMPRAYGEAV HHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESMGKSETVVLQDAKLRPVPEVVAAHRTRRAHVAADGTAARSAMSSSHNLGVSILEGGVS HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHEECCCCC VPDEVGAGDEKPRGYQLGFFRAKENAQRLMDDLERRGFGFQLHTVRRADAVYYQVFVPED CCHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEHHHHCCEEEEEEEECCC DSGFVGHRLKDAGYETFPLF CCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876