Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189025969
Identifier: 189025969
GI number: 189025969
Start: 809755
End: 810081
Strand: Reverse
Name: 189025969
Synonym: TPASS_0744
Alternate gene names: NA
Gene position: 810081-809755 (Counterclockwise)
Preceding gene: 189025970
Following gene: 189025968
Centisome position: 71.09
GC content: 56.88
Gene sequence:
>327_bases GTGTTGCTTGAAGTCGGTGACCGAGGGCAGTTTTTATCTGCAGTTGCCTCTGGTCATGCTGCGCGTGGAACACGAGGCGG TGATGTTGTGTGTGCGGCAGTTAGTGTGCTTTTGCGCACTGCGGTGCTTGGGCTTGAGCGTTTGGGTCCTCAGATAGAGG CGGCGGATCGGGGTTTTCTCTCCTTTCGCGTGGGGGGGTGTCCGGATTCCGCGTTGGCTCTCTTGTGTTTCACTGCGGAG TTTCTAGAACGTGGTTTACGTACGTTGATGCAGGAGTATCCCAGTTCGGTGCATCTTTGCGTGCGGAGGGGAGTGGTGTG TGCGTAG
Upstream 100 bases:
>100_bases GTATAAGAGCAAGAAGGATTACCACCGAACTATCGGTCATCGGCAGTGGTACACTCGCTTGACCGTTAGTGACATCTTGG GGGTGTAGGCTCTGGTCCGA
Downstream 100 bases:
>100_bases CGTCGCGGTTAAGACAAAACGGGGGGTAGTATGGCTCGAAAGAGAGGTGGCAGTGGATCTAAGAACGGGCGCGATTCTAA TCCGAAGTATTTGGGAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MLLEVGDRGQFLSAVASGHAARGTRGGDVVCAAVSVLLRTAVLGLERLGPQIEAADRGFLSFRVGGCPDSALALLCFTAE FLERGLRTLMQEYPSSVHLCVRRGVVCA
Sequences:
>Translated_108_residues MLLEVGDRGQFLSAVASGHAARGTRGGDVVCAAVSVLLRTAVLGLERLGPQIEAADRGFLSFRVGGCPDSALALLCFTAE FLERGLRTLMQEYPSSVHLCVRRGVVCA >Mature_108_residues MLLEVGDRGQFLSAVASGHAARGTRGGDVVCAAVSVLLRTAVLGLERLGPQIEAADRGFLSFRVGGCPDSALALLCFTAE FLERGLRTLMQEYPSSVHLCVRRGVVCA
Specific function: Unknown
COG id: COG2868
COG function: function code J; Predicted ribosomal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11391; Mature: 11391
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLEVGDRGQFLSAVASGHAARGTRGGDVVCAAVSVLLRTAVLGLERLGPQIEAADRGFL CEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE SFRVGGCPDSALALLCFTAEFLERGLRTLMQEYPSSVHLCVRRGVVCA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC >Mature Secondary Structure MLLEVGDRGQFLSAVASGHAARGTRGGDVVCAAVSVLLRTAVLGLERLGPQIEAADRGFL CEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE SFRVGGCPDSALALLCFTAEFLERGLRTLMQEYPSSVHLCVRRGVVCA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA