Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is dat [H]
Identifier: 189025375
GI number: 189025375
Start: 163092
End: 163625
Strand: Direct
Name: dat [H]
Synonym: TPASS_0141
Alternate gene names: 189025375
Gene position: 163092-163625 (Clockwise)
Preceding gene: 189025371
Following gene: 189025379
Centisome position: 14.31
GC content: 55.99
Gene sequence:
>534_bases ATGTCTGTGCATCAGGGTGGGATACGTTTTCCCTTGCTGTATCTAGAGATGGAAACACCGCTCGGTCGTATGTGCATAGC CGAGCGAGCGCACACTATTGTGTATGTGTGGTTCCATCGGGTTGGTCCAAGAGGATCTCCTGTATCTGGTGTGTGCGCGC AGCACGTGTGCCCGGGTAAAACGGCGCTCTTGCGTGAGACGCAGTCCCAAATTCACGCTTACTTTTGTGGAGCGCTGCGC GAGTTTTCAGTACCGGTCACGGTAGAGGGCACGCCTTTTATGCAACGCGTCTGGGGCGCCACGCGCAACATCGCGTACGG CACGACAAAAAGCTATGCACAGCTTTCACAGGACATCGGCTGTCCACGCGCCGCACGCGCAGTTGGGCAGGCATTGCATC GCAACCCGCTGCTTTTGCTTATTCCTTGCCATCGGGTAATAAGTGCGCGTGCATCAATCGGCGGTTTTGCGTACGGGAGT GCTCTCAAGCATTTTTTGCTGCAGCAAGAGGCGGCTGTGTGCGCATGTGAATGA
Upstream 100 bases:
>100_bases ATACGAACACGATAAGAACACATAGGTCGTAAAGATCAGATGTAGTTTTTCTTTGAAAAACGAGGATATCTGTGTTCGTG GAGGGGGAGAGAGACAGGCA
Downstream 100 bases:
>100_bases CGGTGTCCGCAAGGGCTGCCGCTTCTGTACTGTCGTGCGTGACGTAGACTGCAGTGTACCCAAGTGAACGCTGCAGCGCG CGCAGCTCTCCTTGCAACGT
Product: methylated-DNA-protein-cysteine S-methyltransferase
Products: NA
Alternate protein names: 6-O-methylguanine-DNA methyltransferase; MGMT; O-6-methylguanine-DNA-alkyltransferase [H]
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSVHQGGIRFPLLYLEMETPLGRMCIAERAHTIVYVWFHRVGPRGSPVSGVCAQHVCPGKTALLRETQSQIHAYFCGALR EFSVPVTVEGTPFMQRVWGATRNIAYGTTKSYAQLSQDIGCPRAARAVGQALHRNPLLLLIPCHRVISARASIGGFAYGS ALKHFLLQQEAAVCACE
Sequences:
>Translated_177_residues MSVHQGGIRFPLLYLEMETPLGRMCIAERAHTIVYVWFHRVGPRGSPVSGVCAQHVCPGKTALLRETQSQIHAYFCGALR EFSVPVTVEGTPFMQRVWGATRNIAYGTTKSYAQLSQDIGCPRAARAVGQALHRNPLLLLIPCHRVISARASIGGFAYGS ALKHFLLQQEAAVCACE >Mature_176_residues SVHQGGIRFPLLYLEMETPLGRMCIAERAHTIVYVWFHRVGPRGSPVSGVCAQHVCPGKTALLRETQSQIHAYFCGALRE FSVPVTVEGTPFMQRVWGATRNIAYGTTKSYAQLSQDIGCPRAARAVGQALHRNPLLLLIPCHRVISARASIGGFAYGSA LKHFLLQQEAAVCACE
Specific function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a sui
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MGMT family [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=161, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=5e-14, Organism=Escherichia coli, GI1788542, Length=90, Percent_Identity=43.3333333333333, Blast_Score=81, Evalue=3e-17, Organism=Escherichia coli, GI1787596, Length=104, Percent_Identity=39.4230769230769, Blast_Score=81, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115533068, Length=82, Percent_Identity=42.6829268292683, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533070, Length=82, Percent_Identity=42.6829268292683, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320001, Length=82, Percent_Identity=37.8048780487805, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF01035 DNA_binding_1; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 19379; Mature: 19248
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVHQGGIRFPLLYLEMETPLGRMCIAERAHTIVYVWFHRVGPRGSPVSGVCAQHVCPGK CCCCCCCCCCEEEEEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHCCCCCH TALLRETQSQIHAYFCGALREFSVPVTVEGTPFMQRVWGATRNIAYGTTKSYAQLSQDIG HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCC CPRAARAVGQALHRNPLLLLIPCHRVISARASIGGFAYGSALKHFLLQQEAAVCACE CCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVHQGGIRFPLLYLEMETPLGRMCIAERAHTIVYVWFHRVGPRGSPVSGVCAQHVCPGK CCCCCCCCCEEEEEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHCCCCCH TALLRETQSQIHAYFCGALREFSVPVTVEGTPFMQRVWGATRNIAYGTTKSYAQLSQDIG HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCC CPRAARAVGQALHRNPLLLLIPCHRVISARASIGGFAYGSALKHFLLQQEAAVCACE CCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]