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The map label for this gene is yqjE [H]

Identifier: 188586509

GI number: 188586509

Start: 1987170

End: 1988276

Strand: Reverse

Name: yqjE [H]

Synonym: Nther_1895

Alternate gene names: 188586509

Gene position: 1988276-1987170 (Counterclockwise)

Preceding gene: 188586510

Following gene: 188586508

Centisome position: 62.81

GC content: 39.02

Gene sequence:

>1107_bases
ATGACCAATAAGGACCGGTTAAAGGAACTGTTTTTTGAATTAGCGGAGATCGATAGTGAATCAGGGAAAGAGCGTCAAAT
GGCAGATCGTCTGAAGGAGAAGCTGCGAGAGTTAGGCGGAGACCCTTACGAAGACAATGCCGGGGAAAAAATGGGGACTG
AAGCTGGTAATGTAATATGCAGAATAGAAGGTGATAATTCTAAAGAACCAGTAATTTTAAGTGCTCACATGGATACTGTT
AAACCTGGGGTTGGGAAAAAACCTGTCATAGAAGGCGATGTGATTAAAAGTCAAGGAGATACTGTTTTAGGTTCAGATGA
TGCTGGGGGAATAGCAGCTATTTTAGAAGCGATTAAAACAGCTCAAGAACGTAATGAAAGCCACGCACCAATAGAAGTTG
TTTTTACAGCTTATGAAGAAGGTGGATTGAATGGGTCTAGAAGAATGGATTTTAATAGGTTGACAGCTAAGAAGAGTTAC
ATATTTGATAGTAATGGACCTGTGGGAACCATGATAGTTGAAGCACCGGGACAAGATAAATACGATATTAAAATTAAAGG
ACGATCAGCTCATGCAGGTTTAAAACCAGAAGATGGAATTAATGCTATTAAAGTAGCGGCTGAAATAATATCTGACTTGA
AGCTAGGCAGATTAGATGATCAAACGACAGCTAATATTGGAGTTATTAGGGCTGGAGAAGAAACTAATGTGGTTTGTCCC
CTGGCGAAAATGGAAGGGGAGGCTCGTAGTCGTGATGAACAACGGTTAAAAGAAGTTACTGAAAAGATGCGCCAAACATG
TGAAACATACTGTGAACAGTATGGTGCTGAACTAGAATTTGATGCACAACGACTTTACTCAGCATATAAGCTTGATCAAA
AAGATGAAGTAGTTCAACACTGTTTGAATGCTTTGAATAAAGTGGGCTTACAACCTAAATATGAAGCAACTGGCGGCGGT
AGTGATGCTAACATTTTTAATGCCAATGGAATTGAAACAGTTAATCTTGGAATGGGTTACGAAAAAGTTCACACTACTGA
TGAATACATTCCTGTTAAAGAATTGGAGAATGCAGCCGATTTAGCTTATTACTTAATAACGGTTTAA

Upstream 100 bases:

>100_bases
ATATCATAAAAAAACAGGAAAAAAAGTCAATTTTGCAGAATACTTTATATGCCACAAAAGATATTCCTATATTTTAGTAA
GGATGGGAGGTATCTGAATA

Downstream 100 bases:

>100_bases
TTTAAAACCCCTATATCTTAACTGTCAGGGGTGGTAAACCCGACAATTTTATAATAGAGTATATATATGAAGAGGGTAAA
GGAAGTGACAATTATGAAAT

Product: peptidase T-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTNKDRLKELFFELAEIDSESGKERQMADRLKEKLRELGGDPYEDNAGEKMGTEAGNVICRIEGDNSKEPVILSAHMDTV
KPGVGKKPVIEGDVIKSQGDTVLGSDDAGGIAAILEAIKTAQERNESHAPIEVVFTAYEEGGLNGSRRMDFNRLTAKKSY
IFDSNGPVGTMIVEAPGQDKYDIKIKGRSAHAGLKPEDGINAIKVAAEIISDLKLGRLDDQTTANIGVIRAGEETNVVCP
LAKMEGEARSRDEQRLKEVTEKMRQTCETYCEQYGAELEFDAQRLYSAYKLDQKDEVVQHCLNALNKVGLQPKYEATGGG
SDANIFNANGIETVNLGMGYEKVHTTDEYIPVKELENAADLAYYLITV

Sequences:

>Translated_368_residues
MTNKDRLKELFFELAEIDSESGKERQMADRLKEKLRELGGDPYEDNAGEKMGTEAGNVICRIEGDNSKEPVILSAHMDTV
KPGVGKKPVIEGDVIKSQGDTVLGSDDAGGIAAILEAIKTAQERNESHAPIEVVFTAYEEGGLNGSRRMDFNRLTAKKSY
IFDSNGPVGTMIVEAPGQDKYDIKIKGRSAHAGLKPEDGINAIKVAAEIISDLKLGRLDDQTTANIGVIRAGEETNVVCP
LAKMEGEARSRDEQRLKEVTEKMRQTCETYCEQYGAELEFDAQRLYSAYKLDQKDEVVQHCLNALNKVGLQPKYEATGGG
SDANIFNANGIETVNLGMGYEKVHTTDEYIPVKELENAADLAYYLITV
>Mature_367_residues
TNKDRLKELFFELAEIDSESGKERQMADRLKEKLRELGGDPYEDNAGEKMGTEAGNVICRIEGDNSKEPVILSAHMDTVK
PGVGKKPVIEGDVIKSQGDTVLGSDDAGGIAAILEAIKTAQERNESHAPIEVVFTAYEEGGLNGSRRMDFNRLTAKKSYI
FDSNGPVGTMIVEAPGQDKYDIKIKGRSAHAGLKPEDGINAIKVAAEIISDLKLGRLDDQTTANIGVIRAGEETNVVCPL
AKMEGEARSRDEQRLKEVTEKMRQTCETYCEQYGAELEFDAQRLYSAYKLDQKDEVVQHCLNALNKVGLQPKYEATGGGS
DANIFNANGIETVNLGMGYEKVHTTDEYIPVKELENAADLAYYLITV

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=277, Percent_Identity=23.826714801444, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4 [C]

Molecular weight: Translated: 40362; Mature: 40231

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKDRLKELFFELAEIDSESGKERQMADRLKEKLRELGGDPYEDNAGEKMGTEAGNVIC
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
RIEGDNSKEPVILSAHMDTVKPGVGKKPVIEGDVIKSQGDTVLGSDDAGGIAAILEAIKT
EEECCCCCCCEEEEECCHHCCCCCCCCCCCCCCEECCCCCEEECCCCCCHHHHHHHHHHH
AQERNESHAPIEVVFTAYEEGGLNGSRRMDFNRLTAKKSYIFDSNGPVGTMIVEAPGQDK
HHHCCCCCCCEEEEEEEHHCCCCCCCCCCCHHHHHHHHCEEEECCCCEEEEEEECCCCCC
YDIKIKGRSAHAGLKPEDGINAIKVAAEIISDLKLGRLDDQTTANIGVIRAGEETNVVCP
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEE
LAKMEGEARSRDEQRLKEVTEKMRQTCETYCEQYGAELEFDAQRLYSAYKLDQKDEVVQH
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHH
CLNALNKVGLQPKYEATGGGSDANIFNANGIETVNLGMGYEKVHTTDEYIPVKELENAAD
HHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHHHCCCCCCCCHHHHCCHHH
LAYYLITV
EEEEEEEC
>Mature Secondary Structure 
TNKDRLKELFFELAEIDSESGKERQMADRLKEKLRELGGDPYEDNAGEKMGTEAGNVIC
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
RIEGDNSKEPVILSAHMDTVKPGVGKKPVIEGDVIKSQGDTVLGSDDAGGIAAILEAIKT
EEECCCCCCCEEEEECCHHCCCCCCCCCCCCCCEECCCCCEEECCCCCCHHHHHHHHHHH
AQERNESHAPIEVVFTAYEEGGLNGSRRMDFNRLTAKKSYIFDSNGPVGTMIVEAPGQDK
HHHCCCCCCCEEEEEEEHHCCCCCCCCCCCHHHHHHHHCEEEECCCCEEEEEEECCCCCC
YDIKIKGRSAHAGLKPEDGINAIKVAAEIISDLKLGRLDDQTTANIGVIRAGEETNVVCP
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEE
LAKMEGEARSRDEQRLKEVTEKMRQTCETYCEQYGAELEFDAQRLYSAYKLDQKDEVVQH
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHH
CLNALNKVGLQPKYEATGGGSDANIFNANGIETVNLGMGYEKVHTTDEYIPVKELENAAD
HHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHHHCCCCCCCCHHHHCCHHH
LAYYLITV
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]