| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yitG [H]
Identifier: 188586475
GI number: 188586475
Start: 1946064
End: 1947287
Strand: Reverse
Name: yitG [H]
Synonym: Nther_1860
Alternate gene names: 188586475
Gene position: 1947287-1946064 (Counterclockwise)
Preceding gene: 188586476
Following gene: 188586474
Centisome position: 61.51
GC content: 36.19
Gene sequence:
>1224_bases ATGCAACAGGAAACAAAAAAATATTTAGCAGCTTTGAGTGGAGTGCCATTTATTATGGTTCTGGGAAACTCTTTAATTAT TCCAGCATTCCCTGAGATCCAAAATCAGCTCAATCTAACACAACTTGAAGTTGGATTGCTTGTAACAACTTTTTCTATAG CAGCAGGGATTACAATACCTATTGTTGGTTTTATTTCCGATAAATATGGTCGTAAAGTAGTACTAGTACCTTCTGTTTTT TTATATGCTATAGGAGGCTTAATAAGTGGCTTTGCACCTATATTTTTTAATTCCGCTTATCCCTGGATAATTTTTGGGAG AGTTGTAAAGGGAATAGGAGCTGGTGGAACTGGTCCCATTGCTATGGCTTTAGCAGGTGATTTATTTCAATCAGGTGAAC GAAGTGAGGCTATGGGGGTTCTGGAAGCGGCTAATGGTATAGGAAAGGTTGTAAGTCCTATCTTAGGTGCTATAATAGTT GTTTGGATATGGTACTCAGTTTTTTTTGTTTACACTATATTTTCTTTGCCAGTTGCTATCATGTTATGGGTGGTTTTAAA AGAGCCAGAGCAAAAGGCAGGAGGTAGTAGTCAAGAAGAAAAAGGTTATTTTACCAGGATTTTTGATGTTTTCAAAGATA AAAAGATGGTATTAATAGCTACTTATTTGGCGGGATTCACTGTATTATTTTCTTTATTTGGTACTCTATCATACCTTTCG GATATTTTAGAGATAAGATATAATTTAGAGGGAGCACCTAAGGGAATAGTTATAGCGCTTCCTGTAATTGTCATGGCAGT TACTTCTTACACTACAGGGCATTTCATTCAGTCCAAATTACTTATGAGTAAATTGGTTGTAACTGGTTTGACAATTATCG GGCTTTCTTTTGGCGGAATAATTTTATTGTTGGATAATGATTACGCTTTATTTGCTGGTATAATTTTAATAGGTGTTGGT ACTGGTCTTGTTTTAACATCAGTTAATACTCTAGTAACTAGCACTGCGTCTGGAAGGGCCAGGGGTGGAGTTACTTCTTT ATATGGTAGTGTAAGGTTCTTCGGAGTGGCTTTTGGGCCACCGGCTTTTGGTCTGTTAGTTGAAATATCTAGGATTGCTA TGTTTGGTACTGCCGGGATAATTGCTATACTTGTTATGGGTGTTAATTTAATTATGATAAAATTTGGTATAGGGAGAGAA CTTAACCTATCAAACTCAAATTAA
Upstream 100 bases:
>100_bases TCTGAGCTGATATAAAAAGTATAAAAGCAATTTTACAATAAAGGATATAAATAGACGCTAATTGACATACATTACAATTA TACAGGAGAGTGAGCAGAAA
Downstream 100 bases:
>100_bases TGAATAAATGACATGACCCTAGTGAGTGACCCTTATCTTAGATTAGATATGATGGCTGATCCTATCCAGAGGAACTGATG TGGTTATAAATAAATAATAA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MQQETKKYLAALSGVPFIMVLGNSLIIPAFPEIQNQLNLTQLEVGLLVTTFSIAAGITIPIVGFISDKYGRKVVLVPSVF LYAIGGLISGFAPIFFNSAYPWIIFGRVVKGIGAGGTGPIAMALAGDLFQSGERSEAMGVLEAANGIGKVVSPILGAIIV VWIWYSVFFVYTIFSLPVAIMLWVVLKEPEQKAGGSSQEEKGYFTRIFDVFKDKKMVLIATYLAGFTVLFSLFGTLSYLS DILEIRYNLEGAPKGIVIALPVIVMAVTSYTTGHFIQSKLLMSKLVVTGLTIIGLSFGGIILLLDNDYALFAGIILIGVG TGLVLTSVNTLVTSTASGRARGGVTSLYGSVRFFGVAFGPPAFGLLVEISRIAMFGTAGIIAILVMGVNLIMIKFGIGRE LNLSNSN
Sequences:
>Translated_407_residues MQQETKKYLAALSGVPFIMVLGNSLIIPAFPEIQNQLNLTQLEVGLLVTTFSIAAGITIPIVGFISDKYGRKVVLVPSVF LYAIGGLISGFAPIFFNSAYPWIIFGRVVKGIGAGGTGPIAMALAGDLFQSGERSEAMGVLEAANGIGKVVSPILGAIIV VWIWYSVFFVYTIFSLPVAIMLWVVLKEPEQKAGGSSQEEKGYFTRIFDVFKDKKMVLIATYLAGFTVLFSLFGTLSYLS DILEIRYNLEGAPKGIVIALPVIVMAVTSYTTGHFIQSKLLMSKLVVTGLTIIGLSFGGIILLLDNDYALFAGIILIGVG TGLVLTSVNTLVTSTASGRARGGVTSLYGSVRFFGVAFGPPAFGLLVEISRIAMFGTAGIIAILVMGVNLIMIKFGIGRE LNLSNSN >Mature_407_residues MQQETKKYLAALSGVPFIMVLGNSLIIPAFPEIQNQLNLTQLEVGLLVTTFSIAAGITIPIVGFISDKYGRKVVLVPSVF LYAIGGLISGFAPIFFNSAYPWIIFGRVVKGIGAGGTGPIAMALAGDLFQSGERSEAMGVLEAANGIGKVVSPILGAIIV VWIWYSVFFVYTIFSLPVAIMLWVVLKEPEQKAGGSSQEEKGYFTRIFDVFKDKKMVLIATYLAGFTVLFSLFGTLSYLS DILEIRYNLEGAPKGIVIALPVIVMAVTSYTTGHFIQSKLLMSKLVVTGLTIIGLSFGGIILLLDNDYALFAGIILIGVG TGLVLTSVNTLVTSTASGRARGGVTSLYGSVRFFGVAFGPPAFGLLVEISRIAMFGTAGIIAILVMGVNLIMIKFGIGRE LNLSNSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI2367379, Length=361, Percent_Identity=23.5457063711911, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790195, Length=178, Percent_Identity=25.8426966292135, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87082231, Length=212, Percent_Identity=25.9433962264151, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1790146, Length=192, Percent_Identity=23.4375, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI48994889, Length=198, Percent_Identity=25.7575757575758, Blast_Score=62, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6324264, Length=200, Percent_Identity=25, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43314; Mature: 43314
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQETKKYLAALSGVPFIMVLGNSLIIPAFPEIQNQLNLTQLEVGLLVTTFSIAAGITIP CCHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHE IVGFISDKYGRKVVLVPSVFLYAIGGLISGFAPIFFNSAYPWIIFGRVVKGIGAGGTGPI EEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH AMALAGDLFQSGERSEAMGVLEAANGIGKVVSPILGAIIVVWIWYSVFFVYTIFSLPVAI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLWVVLKEPEQKAGGSSQEEKGYFTRIFDVFKDKKMVLIATYLAGFTVLFSLFGTLSYLS HHHHHHCCCHHHCCCCCCHHCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH DILEIRYNLEGAPKGIVIALPVIVMAVTSYTTGHFIQSKLLMSKLVVTGLTIIGLSFGGI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCE ILLLDNDYALFAGIILIGVGTGLVLTSVNTLVTSTASGRARGGVTSLYGSVRFFGVAFGP EEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEECC PAFGLLVEISRIAMFGTAGIIAILVMGVNLIMIKFGIGRELNLSNSN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCC >Mature Secondary Structure MQQETKKYLAALSGVPFIMVLGNSLIIPAFPEIQNQLNLTQLEVGLLVTTFSIAAGITIP CCHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHE IVGFISDKYGRKVVLVPSVFLYAIGGLISGFAPIFFNSAYPWIIFGRVVKGIGAGGTGPI EEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH AMALAGDLFQSGERSEAMGVLEAANGIGKVVSPILGAIIVVWIWYSVFFVYTIFSLPVAI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLWVVLKEPEQKAGGSSQEEKGYFTRIFDVFKDKKMVLIATYLAGFTVLFSLFGTLSYLS HHHHHHCCCHHHCCCCCCHHCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH DILEIRYNLEGAPKGIVIALPVIVMAVTSYTTGHFIQSKLLMSKLVVTGLTIIGLSFGGI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCE ILLLDNDYALFAGIILIGVGTGLVLTSVNTLVTSTASGRARGGVTSLYGSVRFFGVAFGP EEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEECC PAFGLLVEISRIAMFGTAGIIAILVMGVNLIMIKFGIGRELNLSNSN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]