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The map label for this gene is yvbF [H]

Identifier: 188586444

GI number: 188586444

Start: 1902849

End: 1903385

Strand: Reverse

Name: yvbF [H]

Synonym: Nther_1829

Alternate gene names: 188586444

Gene position: 1903385-1902849 (Counterclockwise)

Preceding gene: 188586445

Following gene: 188586443

Centisome position: 60.13

GC content: 34.08

Gene sequence:

>537_bases
ATGAATAATGATTTAGAAAGAATAGAAGAAGCTAGAGATATAATTATTAGTGCTATAGCACAAACAATGGTGATGTATGG
TTTAACTCCTTCTGTTGGCCGCATTTACGGAGTATTGTATTTTGCTAAAAAACCTATGTCATTAAATGAAATAAAAGATG
CTGTTGCTATGAGTAAAGGCAGTGTGAGTAACGGCCTCCGTGACCTACTAGAGTCAGAGATGATCATTAAGGTTTGGCAA
AAAGGTGATAGAAAAGATTACTATATTGCAGAACGAGATTTCGCTAAAAACTTTCTTAATTTCCTAATTAAAAATATGAG
GCTTGAAAGGAACTTGATTTTAAAGGCCAATGATAAGGTTCAGCCAGTGTTAGAGGATATTGCGGAAAACCCTGATTCAG
CTGAAGCAAAAGAAGAAGCTAAGAATGACTTAAAATTACTTGAACAAAGCAGAGAATATTTTGATTGGACTAAAAGGATA
ATCGATGCACTAGAAAGCGGGGAAATATTTGAGTATTTTCCCATGGATAAAAAGTAA

Upstream 100 bases:

>100_bases
ATTAGTGTTCAAATTGTTTAAAACTATTTGAACGACTTGAATAACATGAACAACTTTAAATATAAAATTATACATAAAAA
ATTATGGGGAGTTTTGTATT

Downstream 100 bases:

>100_bases
ATTTAATTGGAAAGGAGGTGCAAGGCGATATGGATCTAAATAAATCAGCTCTTTGTTTAATAGATATCCAAAAAGAAAGT
AAGTTTGGAATTGAAAACAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNNDLERIEEARDIIISAIAQTMVMYGLTPSVGRIYGVLYFAKKPMSLNEIKDAVAMSKGSVSNGLRDLLESEMIIKVWQ
KGDRKDYYIAERDFAKNFLNFLIKNMRLERNLILKANDKVQPVLEDIAENPDSAEAKEEAKNDLKLLEQSREYFDWTKRI
IDALESGEIFEYFPMDKK

Sequences:

>Translated_178_residues
MNNDLERIEEARDIIISAIAQTMVMYGLTPSVGRIYGVLYFAKKPMSLNEIKDAVAMSKGSVSNGLRDLLESEMIIKVWQ
KGDRKDYYIAERDFAKNFLNFLIKNMRLERNLILKANDKVQPVLEDIAENPDSAEAKEEAKNDLKLLEQSREYFDWTKRI
IDALESGEIFEYFPMDKK
>Mature_178_residues
MNNDLERIEEARDIIISAIAQTMVMYGLTPSVGRIYGVLYFAKKPMSLNEIKDAVAMSKGSVSNGLRDLLESEMIIKVWQ
KGDRKDYYIAERDFAKNFLNFLIKNMRLERNLILKANDKVQPVLEDIAENPDSAEAKEEAKNDLKLLEQSREYFDWTKRI
IDALESGEIFEYFPMDKK

Specific function: Unknown

COG id: COG1510

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20638; Mature: 20638

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDLERIEEARDIIISAIAQTMVMYGLTPSVGRIYGVLYFAKKPMSLNEIKDAVAMSKG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
SVSNGLRDLLESEMIIKVWQKGDRKDYYIAERDFAKNFLNFLIKNMRLERNLILKANDKV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCH
QPVLEDIAENPDSAEAKEEAKNDLKLLEQSREYFDWTKRIIDALESGEIFEYFPMDKK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MNNDLERIEEARDIIISAIAQTMVMYGLTPSVGRIYGVLYFAKKPMSLNEIKDAVAMSKG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
SVSNGLRDLLESEMIIKVWQKGDRKDYYIAERDFAKNFLNFLIKNMRLERNLILKANDKV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCH
QPVLEDIAENPDSAEAKEEAKNDLKLLEQSREYFDWTKRIIDALESGEIFEYFPMDKK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]