Click here to switch to the map view.

The map label for this gene is opuAC [H]

Identifier: 188586442

GI number: 188586442

Start: 1901228

End: 1902103

Strand: Reverse

Name: opuAC [H]

Synonym: Nther_1827

Alternate gene names: 188586442

Gene position: 1902103-1901228 (Counterclockwise)

Preceding gene: 188586443

Following gene: 188586441

Centisome position: 60.09

GC content: 36.87

Gene sequence:

>876_bases
ATGCGAAAGCTGAAATTAGTACTAGTGACAATGATAACAATTGTTTTATTAACTGCCTGTACCAATGGAGGAGGCGGTGT
TACAGCTGGAGAAGAATCAAAAGAAACCATAAAATTTGGAATGACAGATTGGACAAGTACAGCAGTTCCAACAGAAATTG
CCAGACAAATTTTAGAAGAAGCAGGTTATGAAACAGAAACAACTAATGCAGATCAGCCAGTAATTTTTGTAGGATTAGTG
GATGAAGAAATTGATTTCTTTATGGATGCATGGTTACCCTATACAGAAGAGGCCCTTTGGGACGAGCATGGAGAAGATCT
ACAGAAAGTATCTGCAAGTTATAAAGAAGCTCCCTTAGGTTGGGTTGTTCCCGAATATGTGGAGGAAGACACTCTAGATG
AGTTTTTGGCTAATCTAGATAAGTATAATAATGAAATTGTAGGTATTGACTCTGGAGCAGGCATATCAGAAATCTCTAAA
GAAATGATAGAAGATCTTGGAATAGGTGATGAACTTGAATTTGTCCCTTCAAGTGAAGCTGCTATGATGGGTGAAGCCAT
GAGTGCCATGGACAATGAAGAACCAATAGCTTTCCTTGGATGGAGACCTCATTCTATGTTCACTCAATATGATATCAAAT
TTTTAGAGGGTCAAGAGGAATATTTTAAGGCAGATAATGTATATGTAATTTCTTATGAAGGTATTGAAGACAAACATCCG
GAAGCTTATGAAATATTATCAGACTGGAGTATGCCCATTGAAGATTTAGAGGAAATGATGTACGAGCATGAAGAAAATGA
TGTAGAATATGAAGTACTTGCTGAACAGTGGATTAAAGAAAACCGTGACAAAGTTGATGAAATGTTGGGCAATTAA

Upstream 100 bases:

>100_bases
CCCCTGAGAATATGAGAGAAGTTTATGGAAAATTAAATCAAGATGCTAACTTGATTAAACAAAAATCTTAATAATTATTT
AACAAGGAGGTTATAATTTA

Downstream 100 bases:

>100_bases
GTCTTCTTAATAGCAATCTTCTTATATAAGGTTAAAATATTGGTAGAACTCTTAGATATTTTGTGCAATTTACAAAAAAT
GACAGGGTCTAAAAACCCTG

Product: Substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRKLKLVLVTMITIVLLTACTNGGGGVTAGEESKETIKFGMTDWTSTAVPTEIARQILEEAGYETETTNADQPVIFVGLV
DEEIDFFMDAWLPYTEEALWDEHGEDLQKVSASYKEAPLGWVVPEYVEEDTLDEFLANLDKYNNEIVGIDSGAGISEISK
EMIEDLGIGDELEFVPSSEAAMMGEAMSAMDNEEPIAFLGWRPHSMFTQYDIKFLEGQEEYFKADNVYVISYEGIEDKHP
EAYEILSDWSMPIEDLEEMMYEHEENDVEYEVLAEQWIKENRDKVDEMLGN

Sequences:

>Translated_291_residues
MRKLKLVLVTMITIVLLTACTNGGGGVTAGEESKETIKFGMTDWTSTAVPTEIARQILEEAGYETETTNADQPVIFVGLV
DEEIDFFMDAWLPYTEEALWDEHGEDLQKVSASYKEAPLGWVVPEYVEEDTLDEFLANLDKYNNEIVGIDSGAGISEISK
EMIEDLGIGDELEFVPSSEAAMMGEAMSAMDNEEPIAFLGWRPHSMFTQYDIKFLEGQEEYFKADNVYVISYEGIEDKHP
EAYEILSDWSMPIEDLEEMMYEHEENDVEYEVLAEQWIKENRDKVDEMLGN
>Mature_291_residues
MRKLKLVLVTMITIVLLTACTNGGGGVTAGEESKETIKFGMTDWTSTAVPTEIARQILEEAGYETETTNADQPVIFVGLV
DEEIDFFMDAWLPYTEEALWDEHGEDLQKVSASYKEAPLGWVVPEYVEEDTLDEFLANLDKYNNEIVGIDSGAGISEISK
EMIEDLGIGDELEFVPSSEAAMMGEAMSAMDNEEPIAFLGWRPHSMFTQYDIKFLEGQEEYFKADNVYVISYEGIEDKHP
EAYEILSDWSMPIEDLEEMMYEHEENDVEYEVLAEQWIKENRDKVDEMLGN

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33048; Mature: 33048

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLKLVLVTMITIVLLTACTNGGGGVTAGEESKETIKFGMTDWTSTAVPTEIARQILEE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHH
AGYETETTNADQPVIFVGLVDEEIDFFMDAWLPYTEEALWDEHGEDLQKVSASYKEAPLG
CCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
WVVPEYVEEDTLDEFLANLDKYNNEIVGIDSGAGISEISKEMIEDLGIGDELEFVPSSEA
CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH
AMMGEAMSAMDNEEPIAFLGWRPHSMFTQYDIKFLEGQEEYFKADNVYVISYEGIEDKHP
HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHEECCCHHHHCCCCEEEEEECCCCCCCC
EAYEILSDWSMPIEDLEEMMYEHEENDVEYEVLAEQWIKENRDKVDEMLGN
HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKLKLVLVTMITIVLLTACTNGGGGVTAGEESKETIKFGMTDWTSTAVPTEIARQILEE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHH
AGYETETTNADQPVIFVGLVDEEIDFFMDAWLPYTEEALWDEHGEDLQKVSASYKEAPLG
CCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
WVVPEYVEEDTLDEFLANLDKYNNEIVGIDSGAGISEISKEMIEDLGIGDELEFVPSSEA
CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH
AMMGEAMSAMDNEEPIAFLGWRPHSMFTQYDIKFLEGQEEYFKADNVYVISYEGIEDKHP
HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHEECCCHHHHCCCCEEEEEECCCCCCCC
EAYEILSDWSMPIEDLEEMMYEHEENDVEYEVLAEQWIKENRDKVDEMLGN
HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]