| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586343
Identifier: 188586343
GI number: 188586343
Start: 1792852
End: 1793823
Strand: Reverse
Name: 188586343
Synonym: Nther_1726
Alternate gene names: NA
Gene position: 1793823-1792852 (Counterclockwise)
Preceding gene: 188586344
Following gene: 188586342
Centisome position: 56.67
GC content: 28.91
Gene sequence:
>972_bases ATGACATATTCAAAGGCTTTTGGTTTATTTGATCAAAACGCTATTGGAGTAAATTTTGATAGTCACGGTCTAAAAATAGT CCAATTAGGTAAAAGGGGTAACAAAATTATATGTAAAAAGATAGAAGACATTAATATTCAAGATCAAGGGAACCAGGATA CCGTCGATTTTTTGCAAAGTAGGATAGATAGATTAAGAGAATATTTTGTAGCTAATAGTTTAACAAAAAAACAGATTTAT TTTGCCATAAAATCTAAAGATATAATAATTAAAACCATTCAATTGCCAAATATGTCAAAAAAAGATATAGATTCGGCTAT TAAACTACGGATAGAAACCCAATTAATTCTTCCATGGGATAATGTGGTTGTAGACTGGTTTATCTTAAATAGAAGTGAAA CTAATACAAAAGTTTTAATAGTAGCAGCCCAGAAGGAACAAATAAATGATTATTGTCGTGTATTTAAGGATGCTGGACTA ATCATCTCAGCATTAGAAGTTGATGTTTTTTCAATCCTAAGGATGGTAAATTATACATATAGTAATGATCTAACCACAGA ATCTCAACAAATAAACATTATTGTCAATATTAATACTAACTACGTGTCACTAATTTTTTTAGAAGAAAATAAATATATTT TATGTAGAAATGTAAATCTAATAAATTTCGATATACAAAATCAACTTACCTGGGAAAAAATAATACTGGAAATCGAAAGT TCTTTAAATTATATCAATTTTGAAGGGCTTTCGTCTGGTAATCCGAGAACTTTGTTTTTAACTGGAGACTGCCATCAATT TATTGAAAAGCATGTAATCAACACTGAAGTGATTAACAATAACTTGGTTTTGAAACACCAATTAATCAATCCTTTTCAAA AAATTGACGTGGTCAATTTAAATTCTTCTGTCTTACAAGATAAAGTTTCTTATTGTGTAGCAACAGGGCTTGCTTTGCGG AGGTGGTTATAA
Upstream 100 bases:
>100_bases ATTGTGAAAACTTACGATTGTATGCTCCAGATAAAAAAGATTTTAATTCACTATATCAATTAAAGTTGAGTGATTTTAAC TACCCTTTTAGGAGGTAAAT
Downstream 100 bases:
>100_bases CTGAATATTAAAATAGATTTAAGACCACAAGAATTAATAGATAATGAATTAGTCATTAAGAAAAGGAAATTAGGGTTAAT TGTTATAATTGTATACGTTT
Product: Tfp pilus assembly protein ATPase PilM-like protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilM
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTYSKAFGLFDQNAIGVNFDSHGLKIVQLGKRGNKIICKKIEDINIQDQGNQDTVDFLQSRIDRLREYFVANSLTKKQIY FAIKSKDIIIKTIQLPNMSKKDIDSAIKLRIETQLILPWDNVVVDWFILNRSETNTKVLIVAAQKEQINDYCRVFKDAGL IISALEVDVFSILRMVNYTYSNDLTTESQQINIIVNINTNYVSLIFLEENKYILCRNVNLINFDIQNQLTWEKIILEIES SLNYINFEGLSSGNPRTLFLTGDCHQFIEKHVINTEVINNNLVLKHQLINPFQKIDVVNLNSSVLQDKVSYCVATGLALR RWL
Sequences:
>Translated_323_residues MTYSKAFGLFDQNAIGVNFDSHGLKIVQLGKRGNKIICKKIEDINIQDQGNQDTVDFLQSRIDRLREYFVANSLTKKQIY FAIKSKDIIIKTIQLPNMSKKDIDSAIKLRIETQLILPWDNVVVDWFILNRSETNTKVLIVAAQKEQINDYCRVFKDAGL IISALEVDVFSILRMVNYTYSNDLTTESQQINIIVNINTNYVSLIFLEENKYILCRNVNLINFDIQNQLTWEKIILEIES SLNYINFEGLSSGNPRTLFLTGDCHQFIEKHVINTEVINNNLVLKHQLINPFQKIDVVNLNSSVLQDKVSYCVATGLALR RWL >Mature_322_residues TYSKAFGLFDQNAIGVNFDSHGLKIVQLGKRGNKIICKKIEDINIQDQGNQDTVDFLQSRIDRLREYFVANSLTKKQIYF AIKSKDIIIKTIQLPNMSKKDIDSAIKLRIETQLILPWDNVVVDWFILNRSETNTKVLIVAAQKEQINDYCRVFKDAGLI ISALEVDVFSILRMVNYTYSNDLTTESQQINIIVNINTNYVSLIFLEENKYILCRNVNLINFDIQNQLTWEKIILEIESS LNYINFEGLSSGNPRTLFLTGDCHQFIEKHVINTEVINNNLVLKHQLINPFQKIDVVNLNSSVLQDKVSYCVATGLALRR WL
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37230; Mature: 37099
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSKAFGLFDQNAIGVNFDSHGLKIVQLGKRGNKIICKKIEDINIQDQGNQDTVDFLQS CCCCHHCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHH RIDRLREYFVANSLTKKQIYFAIKSKDIIIKTIQLPNMSKKDIDSAIKLRIETQLILPWD HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCHHHCCCEEEEEEEEEEEECCC NVVVDWFILNRSETNTKVLIVAAQKEQINDYCRVFKDAGLIISALEVDVFSILRMVNYTY CEEEEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCC SNDLTTESQQINIIVNINTNYVSLIFLEENKYILCRNVNLINFDIQNQLTWEKIILEIES CCCCCCCCEEEEEEEEECCCEEEEEEEECCCEEEEECCEEEEEECCCCCCHHHHHHHHHC SLNYINFEGLSSGNPRTLFLTGDCHQFIEKHVINTEVINNNLVLKHQLINPFQKIDVVNL CCCEEEECCCCCCCCEEEEEECCHHHHHHHHCCCCEEECCCEEEEEHHCCHHHHEEEEEC NSSVLQDKVSYCVATGLALRRWL CHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TYSKAFGLFDQNAIGVNFDSHGLKIVQLGKRGNKIICKKIEDINIQDQGNQDTVDFLQS CCCHHCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHH RIDRLREYFVANSLTKKQIYFAIKSKDIIIKTIQLPNMSKKDIDSAIKLRIETQLILPWD HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCHHHCCCEEEEEEEEEEEECCC NVVVDWFILNRSETNTKVLIVAAQKEQINDYCRVFKDAGLIISALEVDVFSILRMVNYTY CEEEEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCC SNDLTTESQQINIIVNINTNYVSLIFLEENKYILCRNVNLINFDIQNQLTWEKIILEIES CCCCCCCCEEEEEEEEECCCEEEEEEEECCCEEEEECCEEEEEECCCCCCHHHHHHHHHC SLNYINFEGLSSGNPRTLFLTGDCHQFIEKHVINTEVINNNLVLKHQLINPFQKIDVVNL CCCEEEECCCCCCCCEEEEEECCHHHHHHHHCCCCEEECCCEEEEEHHCCHHHHEEEEEC NSSVLQDKVSYCVATGLALRRWL CHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA