| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is spoIIIAE [H]
Identifier: 188586326
GI number: 188586326
Start: 1780918
End: 1782132
Strand: Reverse
Name: spoIIIAE [H]
Synonym: Nther_1709
Alternate gene names: 188586326
Gene position: 1782132-1780918 (Counterclockwise)
Preceding gene: 188586327
Following gene: 188586325
Centisome position: 56.3
GC content: 36.79
Gene sequence:
>1215_bases ATGAACTTTAAAAAGTTTCGCCAGAGAAAAATAATACTTTTGTTAATAATCTTGTATATATTATTGGTTCCTTCACCAAT AAGTGGTGATACAGGAGGTGAAACAACTGCGGAAGAGCAAATGGAGGACGAGCTAGATCAAATCATGGATCAGCCAGAAA TTGATCAATTAAGGGATCACTGGGAAGAGCTAGATCAGGAAATGTCAGAATATATACCCGACCTATCATTTAGAGATTTA TTTTATATGATAGTTGGTGAAGAAGAAGGTTTTTCACTAGCTCAAGTATTTTCAGGTCTATTACAGTTCTTTCTACACGA AGTCATTGTAAATTTCAGATTACTTGGAAAAGTCATTGTTCTAACTGTAATAGCTGCTTTGTTGACAGCTCTACAAGGAG CCTTTGCCAATGAAAAAGTTGCTCGTCTTGCCCATACCGTAATTTACTTTGCTGTAGTGATTATTGCACTACAGAGTTTT TATCTAGCTGTCGACATTGGTAGAGAAGCAGTTTCAAGTATGGTGGATATCATCTTGGCCATGGTTCCGCTGTTATTAAC TTTATTAGCATCTATGGGGGCAGTTACAACAGTTGCTATTTTCCATCCGATCTCAATTTTCTTAATAAACACTTTTAGTA CCTTGATCAATAATGTGATTTTCCCATTATTACTTTTTTCAGCAGTTTTAAGTGTAATAAGTCACCTTAATCCCAAATTC AAGGTATCTTCTCTTGCAGGTTTGTTCCAAAACATCAGTATTACGGCAATTGGATTCTTTCTAACTATCTTTATCGGAAT CATGGGATTGCAGGGAGTAGGTGGCGCCGTTGCAGATGGTATAAGTATTAGAGCGGCAAAGTTTTTAACAGGTTCTTTTA TACCGGTGATTGGTAAAGCACTATCAGATGCTGTTGAAACTGTCATGGGAGCATCCTTAGTTTTAACTAACAGTGTCACA ATGGCAGGGGCAATTATACTTTTTTTTGTAACCATATTTCCAGCATTAAAAATTTTAGCCCTTGTATTTGTATATAAGTT GGCCGCTTCACTATTAGAACCTTTAGGTGAGACTTCCATACCCGAAAGCCTTGGTACTATGTCGAAATGTTTAACCTGGG TATTTGCAGGAGTAGCTACTGTGTCTATTATGTTTTTTATAGCTATGGCTGCTATTGTTGGCGCAGCTAATGTATCTATG ATGATAAGAGGGTAA
Upstream 100 bases:
>100_bases AGCTGTACCGTTAGTTTTAATGATCTTAGAGACCGTATTAACATTACTACCTTCTTAAATACTCTAGATTTAATTAATCA TGGAAGGATGTTATTGGCTT
Downstream 100 bases:
>100_bases AGTCTGACAGAAAGGGGGAAGGGAAATGCTGAGTACAGTAAATGAACTGATCACAACGATAGTGGTAGTAATTGTCCTGG CAACTTTTTTAGAACTTTTG
Product: stage III sporulation protein AE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MNFKKFRQRKIILLLIILYILLVPSPISGDTGGETTAEEQMEDELDQIMDQPEIDQLRDHWEELDQEMSEYIPDLSFRDL FYMIVGEEEGFSLAQVFSGLLQFFLHEVIVNFRLLGKVIVLTVIAALLTALQGAFANEKVARLAHTVIYFAVVIIALQSF YLAVDIGREAVSSMVDIILAMVPLLLTLLASMGAVTTVAIFHPISIFLINTFSTLINNVIFPLLLFSAVLSVISHLNPKF KVSSLAGLFQNISITAIGFFLTIFIGIMGLQGVGGAVADGISIRAAKFLTGSFIPVIGKALSDAVETVMGASLVLTNSVT MAGAIILFFVTIFPALKILALVFVYKLAASLLEPLGETSIPESLGTMSKCLTWVFAGVATVSIMFFIAMAAIVGAANVSM MIRG
Sequences:
>Translated_404_residues MNFKKFRQRKIILLLIILYILLVPSPISGDTGGETTAEEQMEDELDQIMDQPEIDQLRDHWEELDQEMSEYIPDLSFRDL FYMIVGEEEGFSLAQVFSGLLQFFLHEVIVNFRLLGKVIVLTVIAALLTALQGAFANEKVARLAHTVIYFAVVIIALQSF YLAVDIGREAVSSMVDIILAMVPLLLTLLASMGAVTTVAIFHPISIFLINTFSTLINNVIFPLLLFSAVLSVISHLNPKF KVSSLAGLFQNISITAIGFFLTIFIGIMGLQGVGGAVADGISIRAAKFLTGSFIPVIGKALSDAVETVMGASLVLTNSVT MAGAIILFFVTIFPALKILALVFVYKLAASLLEPLGETSIPESLGTMSKCLTWVFAGVATVSIMFFIAMAAIVGAANVSM MIRG >Mature_404_residues MNFKKFRQRKIILLLIILYILLVPSPISGDTGGETTAEEQMEDELDQIMDQPEIDQLRDHWEELDQEMSEYIPDLSFRDL FYMIVGEEEGFSLAQVFSGLLQFFLHEVIVNFRLLGKVIVLTVIAALLTALQGAFANEKVARLAHTVIYFAVVIIALQSF YLAVDIGREAVSSMVDIILAMVPLLLTLLASMGAVTTVAIFHPISIFLINTFSTLINNVIFPLLLFSAVLSVISHLNPKF KVSSLAGLFQNISITAIGFFLTIFIGIMGLQGVGGAVADGISIRAAKFLTGSFIPVIGKALSDAVETVMGASLVLTNSVT MAGAIILFFVTIFPALKILALVFVYKLAASLLEPLGETSIPESLGTMSKCLTWVFAGVATVSIMFFIAMAAIVGAANVSM MIRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014194 [H]
Pfam domain/function: PF09546 Spore_III_AE [H]
EC number: NA
Molecular weight: Translated: 43804; Mature: 43804
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKKFRQRKIILLLIILYILLVPSPISGDTGGETTAEEQMEDELDQIMDQPEIDQLRDH CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH WEELDQEMSEYIPDLSFRDLFYMIVGEEEGFSLAQVFSGLLQFFLHEVIVNFRLLGKVIV HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTVIAALLTALQGAFANEKVARLAHTVIYFAVVIIALQSFYLAVDIGREAVSSMVDIILA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVPLLLTLLASMGAVTTVAIFHPISIFLINTFSTLINNVIFPLLLFSAVLSVISHLNPKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH KVSSLAGLFQNISITAIGFFLTIFIGIMGLQGVGGAVADGISIRAAKFLTGSFIPVIGKA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCHHHHHHHH LSDAVETVMGASLVLTNSVTMAGAIILFFVTIFPALKILALVFVYKLAASLLEPLGETSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PESLGTMSKCLTWVFAGVATVSIMFFIAMAAIVGAANVSMMIRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure MNFKKFRQRKIILLLIILYILLVPSPISGDTGGETTAEEQMEDELDQIMDQPEIDQLRDH CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH WEELDQEMSEYIPDLSFRDLFYMIVGEEEGFSLAQVFSGLLQFFLHEVIVNFRLLGKVIV HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTVIAALLTALQGAFANEKVARLAHTVIYFAVVIIALQSFYLAVDIGREAVSSMVDIILA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVPLLLTLLASMGAVTTVAIFHPISIFLINTFSTLINNVIFPLLLFSAVLSVISHLNPKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH KVSSLAGLFQNISITAIGFFLTIFIGIMGLQGVGGAVADGISIRAAKFLTGSFIPVIGKA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCHHHHHHHH LSDAVETVMGASLVLTNSVTMAGAIILFFVTIFPALKILALVFVYKLAASLLEPLGETSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PESLGTMSKCLTWVFAGVATVSIMFFIAMAAIVGAANVSMMIRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]