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The map label for this gene is spo0A [H]

Identifier: 188586306

GI number: 188586306

Start: 1763836

End: 1764678

Strand: Reverse

Name: spo0A [H]

Synonym: Nther_1689

Alternate gene names: 188586306

Gene position: 1764678-1763836 (Counterclockwise)

Preceding gene: 188586307

Following gene: 188586305

Centisome position: 55.75

GC content: 32.98

Gene sequence:

>843_bases
TTGTTGATTGATATTTTAATTGTAGATGATAATAAAGAATTTTGTGAAATTTTGAAGGATTACTTGGCTGAACATGACGA
TTTTAATGTTGTGGGTACTGCACATAATGGAGAAGAAGCTATCGAAAAAATTAAACAAAGTCCCCCTGATATTTTGTTAC
TTGACATTATTATGCCAATATTAGATGGAATAGGTGTATTAGAGTATCTGCAAAAAGAAGATTTCGAAAATAAGCCCAAA
ACTATTATGCTAACTGCCTTTGGTCACGAAAAGATAACACAACGGGCCGTTAGTCTAGGAGCCGACTATTACATTTTAAA
ACCCTTTAGCATGGATATTTTAGCAGATAGGATCAAACAATTGTATTCAGGTTTTGGGATGTCAAAACCTGAAATTGACA
ATCTAGCTGCTACCGATGATAGTAAAGAAATGGTACTTCAGGATTCTCAGAATATAGGTAATTCCATAAACCCCGAAAAT
AATAAAGTTGATTTAGAAGCAGAAATCACTGATATCATTCACGAATTGGGAGTTCCTGCTCATATAAAAGGATATCTTTA
TTTAAGAAAAGCAATTATGATGGTTATCGAAGACCCTGACTTATTAAATTCGGTAACTAAGATTTTATACCCCAAGATTG
CTGAAACCTTTGAAACTACACCGAGTAGAGTTGAAAGGGCAATTAGACATGCCATTGAAGTAGCATGGAATAGAAATGAT
ATCGAAACCATTAAGAATTTATTTGGATATACCATAAATACTGAAAAAGGGAAGCCAACGAATTCAGAATTTATTGCAAT
TGTAGCCGACAAATTGAGATTAAAAACAAAACAAAGAGCTTAA

Upstream 100 bases:

>100_bases
TTTTATAGGAAAATGAAGGAACTATTTACTGATTTGTCGAAAGCATTTTTTGGCAATAGTTCTTAAATTTTGGATAAATT
ATTATTAAAGGAGGTATTTA

Downstream 100 bases:

>100_bases
ACTCTGAAGGTACATATCGAATTTAACTGATCTATCACTATTTGATCATGATTTAATTTATTTGACAGTTTTCTTTAAAA
GCAATTATAATATAATATTA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLIDILIVDDNKEFCEILKDYLAEHDDFNVVGTAHNGEEAIEKIKQSPPDILLLDIIMPILDGIGVLEYLQKEDFENKPK
TIMLTAFGHEKITQRAVSLGADYYILKPFSMDILADRIKQLYSGFGMSKPEIDNLAATDDSKEMVLQDSQNIGNSINPEN
NKVDLEAEITDIIHELGVPAHIKGYLYLRKAIMMVIEDPDLLNSVTKILYPKIAETFETTPSRVERAIRHAIEVAWNRND
IETIKNLFGYTINTEKGKPTNSEFIAIVADKLRLKTKQRA

Sequences:

>Translated_280_residues
MLIDILIVDDNKEFCEILKDYLAEHDDFNVVGTAHNGEEAIEKIKQSPPDILLLDIIMPILDGIGVLEYLQKEDFENKPK
TIMLTAFGHEKITQRAVSLGADYYILKPFSMDILADRIKQLYSGFGMSKPEIDNLAATDDSKEMVLQDSQNIGNSINPEN
NKVDLEAEITDIIHELGVPAHIKGYLYLRKAIMMVIEDPDLLNSVTKILYPKIAETFETTPSRVERAIRHAIEVAWNRND
IETIKNLFGYTINTEKGKPTNSEFIAIVADKLRLKTKQRA
>Mature_280_residues
MLIDILIVDDNKEFCEILKDYLAEHDDFNVVGTAHNGEEAIEKIKQSPPDILLLDIIMPILDGIGVLEYLQKEDFENKPK
TIMLTAFGHEKITQRAVSLGADYYILKPFSMDILADRIKQLYSGFGMSKPEIDNLAATDDSKEMVLQDSQNIGNSINPEN
NKVDLEAEITDIIHELGVPAHIKGYLYLRKAIMMVIEDPDLLNSVTKILYPKIAETFETTPSRVERAIRHAIEVAWNRND
IETIKNLFGYTINTEKGKPTNSEFIAIVADKLRLKTKQRA

Specific function: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=119, Percent_Identity=34.453781512605, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87082052, Length=107, Percent_Identity=38.3177570093458, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR014879
- InterPro:   IPR012052
- InterPro:   IPR011991
- ProDom:   PD010908 [H]

Pfam domain/function: PF00072 Response_reg; PF08769 Spo0A_C [H]

EC number: NA

Molecular weight: Translated: 31719; Mature: 31719

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDILIVDDNKEFCEILKDYLAEHDDFNVVGTAHNGEEAIEKIKQSPPDILLLDIIMPI
CEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCEEHHHHHHHH
LDGIGVLEYLQKEDFENKPKTIMLTAFGHEKITQRAVSLGADYYILKPFSMDILADRIKQ
HHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
LYSGFGMSKPEIDNLAATDDSKEMVLQDSQNIGNSINPENNKVDLEAEITDIIHELGVPA
HHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCH
HIKGYLYLRKAIMMVIEDPDLLNSVTKILYPKIAETFETTPSRVERAIRHAIEVAWNRND
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH
IETIKNLFGYTINTEKGKPTNSEFIAIVADKLRLKTKQRA
HHHHHHHHCEEEECCCCCCCCCCEEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MLIDILIVDDNKEFCEILKDYLAEHDDFNVVGTAHNGEEAIEKIKQSPPDILLLDIIMPI
CEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCEEHHHHHHHH
LDGIGVLEYLQKEDFENKPKTIMLTAFGHEKITQRAVSLGADYYILKPFSMDILADRIKQ
HHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
LYSGFGMSKPEIDNLAATDDSKEMVLQDSQNIGNSINPENNKVDLEAEITDIIHELGVPA
HHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCH
HIKGYLYLRKAIMMVIEDPDLLNSVTKILYPKIAETFETTPSRVERAIRHAIEVAWNRND
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH
IETIKNLFGYTINTEKGKPTNSEFIAIVADKLRLKTKQRA
HHHHHHHHCEEEECCCCCCCCCCEEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]