Click here to switch to the map view.

The map label for this gene is yfdH [C]

Identifier: 188586302

GI number: 188586302

Start: 1760639

End: 1761334

Strand: Reverse

Name: yfdH [C]

Synonym: Nther_1685

Alternate gene names: 188586302

Gene position: 1761334-1760639 (Counterclockwise)

Preceding gene: 188586303

Following gene: 188586301

Centisome position: 55.64

GC content: 35.2

Gene sequence:

>696_bases
ATGACTTATCCTAAGGTTTCTGCTATTATTCCAGCCTGTAATGAAGGGAATAATATCGTAGATACTATCAGAGGTTTGCA
AGATTTAAATGAAGTTAATGAAATTATTGTTGTAGATGATGGCTCAAAAGATGAAACTTTTGAATTAGCTAAGGCTCAAG
GGGTAAGTTGTGTTAAACTAGATAAAAATTATGGAAAAGGTAAAGCCCTATATACAGGGGTTGAGTCTAGTGATAGTCAG
GTGGTAGCCTTTGTTGATGCTGATCTCGGTCAAACCGCTAAAAAAATCAAGAGTTTGATTACTCCAGTAGTGTGCGGTGA
GGCTGATATGGCAATAGTTAAGTTTCCTAAAGAAGGCAATTATAAATACGGTGGATTTGGATTAGTAAAAAAGTTGGCTA
AAACTGGGACTTATTTATTGACAGGGAAAGTAACCGAAGCTTCTCTGTCAGGACAAAGAGTTATAAACAGAGAACTGGCT
AAACAGCTTTTAGAGTTAGAAATTGACAGTGGATATGGAGTAGAACTGGGAATGACAGTTGAGGCTTTAAAACGAGAAGC
AAAAGTGATTGAAGTTGAAGAAAATATGTCTCACAGAAAGACTGGTAAAGATTTACAAGGGTTCCTTCATCGTGGGAAAC
AGTTTATACAAATTTTGATAACATTATTACGTAAAAAATTTGTTCAAATGTACTAA

Upstream 100 bases:

>100_bases
CTTTAAATGAAAATGACAGGGTAGTTGATTATCTAGAATCTACTGAAATTGTTATTATCCTAGGTCCTGAACCTGAAACT
TTCAATTAGGAGCGTAAATT

Downstream 100 bases:

>100_bases
ACAGATAATTGAACTTGGAGAGTTGTGTATGTGGACCCCATTTTACTGGAAGTTACTAGGACTATTTTTAACAGTATTGT
TAGTAACAAGAGTTAGTTTA

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTYPKVSAIIPACNEGNNIVDTIRGLQDLNEVNEIIVVDDGSKDETFELAKAQGVSCVKLDKNYGKGKALYTGVESSDSQ
VVAFVDADLGQTAKKIKSLITPVVCGEADMAIVKFPKEGNYKYGGFGLVKKLAKTGTYLLTGKVTEASLSGQRVINRELA
KQLLELEIDSGYGVELGMTVEALKREAKVIEVEENMSHRKTGKDLQGFLHRGKQFIQILITLLRKKFVQMY

Sequences:

>Translated_231_residues
MTYPKVSAIIPACNEGNNIVDTIRGLQDLNEVNEIIVVDDGSKDETFELAKAQGVSCVKLDKNYGKGKALYTGVESSDSQ
VVAFVDADLGQTAKKIKSLITPVVCGEADMAIVKFPKEGNYKYGGFGLVKKLAKTGTYLLTGKVTEASLSGQRVINRELA
KQLLELEIDSGYGVELGMTVEALKREAKVIEVEENMSHRKTGKDLQGFLHRGKQFIQILITLLRKKFVQMY
>Mature_230_residues
TYPKVSAIIPACNEGNNIVDTIRGLQDLNEVNEIIVVDDGSKDETFELAKAQGVSCVKLDKNYGKGKALYTGVESSDSQV
VAFVDADLGQTAKKIKSLITPVVCGEADMAIVKFPKEGNYKYGGFGLVKKLAKTGTYLLTGKVTEASLSGQRVINRELAK
QLLELEIDSGYGVELGMTVEALKREAKVIEVEENMSHRKTGKDLQGFLHRGKQFIQILITLLRKKFVQMY

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 25368; Mature: 25237

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYPKVSAIIPACNEGNNIVDTIRGLQDLNEVNEIIVVDDGSKDETFELAKAQGVSCVKL
CCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHCCCEEEEE
DKNYGKGKALYTGVESSDSQVVAFVDADLGQTAKKIKSLITPVVCGEADMAIVKFPKEGN
CCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
YKYGGFGLVKKLAKTGTYLLTGKVTEASLSGQRVINRELAKQLLELEIDSGYGVELGMTV
CCCCCHHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHEECCCCCCEEECCCH
EALKREAKVIEVEENMSHRKTGKDLQGFLHRGKQFIQILITLLRKKFVQMY
HHHHHHHHEEEEHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYPKVSAIIPACNEGNNIVDTIRGLQDLNEVNEIIVVDDGSKDETFELAKAQGVSCVKL
CCCCCHHEECCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHCCCEEEEE
DKNYGKGKALYTGVESSDSQVVAFVDADLGQTAKKIKSLITPVVCGEADMAIVKFPKEGN
CCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
YKYGGFGLVKKLAKTGTYLLTGKVTEASLSGQRVINRELAKQLLELEIDSGYGVELGMTV
CCCCCHHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHEECCCCCCEEECCCH
EALKREAKVIEVEENMSHRKTGKDLQGFLHRGKQFIQILITLLRKKFVQMY
HHHHHHHHEEEEHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]