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The map label for this gene is nudF [H]

Identifier: 188586290

GI number: 188586290

Start: 1749518

End: 1750045

Strand: Reverse

Name: nudF [H]

Synonym: Nther_1673

Alternate gene names: 188586290

Gene position: 1750045-1749518 (Counterclockwise)

Preceding gene: 188586291

Following gene: 188586289

Centisome position: 55.28

GC content: 34.28

Gene sequence:

>528_bases
TTGCAAGAACGTACTATCCAAAAAAACTCTATCTATAATGGTAAAATAGTTTCTTTAGAAAAACATAATGTGGATTTAGG
AGATGGGAAACAAGGTGTTAGGGAAATAGTTCGTCATTCAGGAGCAGCTGCTATTTTACCTTTAACAGGCGGTAATGATG
TATATTTAATTAAGCAATTCCGGAAAGCTTTGGAAAGGCAAACTTGGGAAATTCCCGCTGGTGTTTTAGAGAATGGTGAA
GCACCTGAAGATTGTGCTGCCAGAGAGTTGCGAGAAGAATTGAAAATGTCTGCAAGAAATTTGCAATATTTAACGACTTT
CAGTCCCAGTCCAGGGTATTTGGATGAAGAAGTATATCTATATGTGGCAACTGGGCTTTATGAAGACCCGGCTCTTCAGG
ATGAAGATGAAGTGTTATATACTGAAAAAATAAATTTAAATAATTTAATAGATAAAATTTCATCTGGCGATATTAAAGAT
GCCAAGACAATAATTTCAGTTTTATTTTATCTCAAATTTTACCAATAA

Upstream 100 bases:

>100_bases
ATTGCAAATGGAAACCATGGGTCGTAAAATTAATGATGAGCCTAAATTTTTTGAAACAATCTGGGTAACTGCAAAAAAAA
TTGTTATGGAGTGATTACCT

Downstream 100 bases:

>100_bases
ATTATGGACGGTGATTTATAGATGACGAAGTACTTTACGGATCTACATATACATGTAGGACAAGCTAAAGGCTTACCAGT
TAAAATAACTGCATCCAATA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; ASPPase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MQERTIQKNSIYNGKIVSLEKHNVDLGDGKQGVREIVRHSGAAAILPLTGGNDVYLIKQFRKALERQTWEIPAGVLENGE
APEDCAARELREELKMSARNLQYLTTFSPSPGYLDEEVYLYVATGLYEDPALQDEDEVLYTEKINLNNLIDKISSGDIKD
AKTIISVLFYLKFYQ

Sequences:

>Translated_175_residues
MQERTIQKNSIYNGKIVSLEKHNVDLGDGKQGVREIVRHSGAAAILPLTGGNDVYLIKQFRKALERQTWEIPAGVLENGE
APEDCAARELREELKMSARNLQYLTTFSPSPGYLDEEVYLYVATGLYEDPALQDEDEVLYTEKINLNNLIDKISSGDIKD
AKTIISVLFYLKFYQ
>Mature_175_residues
MQERTIQKNSIYNGKIVSLEKHNVDLGDGKQGVREIVRHSGAAAILPLTGGNDVYLIKQFRKALERQTWEIPAGVLENGE
APEDCAARELREELKMSARNLQYLTTFSPSPGYLDEEVYLYVATGLYEDPALQDEDEVLYTEKINLNNLIDKISSGDIKD
AKTIISVLFYLKFYQ

Specific function: Acts on ADP-mannose and ADP-glucose as well as ADP- ribose. Prevents glycogen biosynthesis. The reaction catalyzed by this enzyme is a limiting step of the gluconeogenic process [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1789800, Length=177, Percent_Identity=25.4237288135593, Blast_Score=63, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 19804; Mature: 19804

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQERTIQKNSIYNGKIVSLEKHNVDLGDGKQGVREIVRHSGAAAILPLTGGNDVYLIKQF
CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEHHHHH
RKALERQTWEIPAGVLENGEAPEDCAARELREELKMSARNLQYLTTFSPSPGYLDEEVYL
HHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEE
YVATGLYEDPALQDEDEVLYTEKINLNNLIDKISSGDIKDAKTIISVLFYLKFYQ
EEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQERTIQKNSIYNGKIVSLEKHNVDLGDGKQGVREIVRHSGAAAILPLTGGNDVYLIKQF
CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEHHHHH
RKALERQTWEIPAGVLENGEAPEDCAARELREELKMSARNLQYLTTFSPSPGYLDEEVYL
HHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEE
YVATGLYEDPALQDEDEVLYTEKINLNNLIDKISSGDIKDAKTIISVLFYLKFYQ
EEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 10542272 [H]