| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586272
Identifier: 188586272
GI number: 188586272
Start: 1733876
End: 1734985
Strand: Reverse
Name: 188586272
Synonym: Nther_1655
Alternate gene names: NA
Gene position: 1734985-1733876 (Counterclockwise)
Preceding gene: 188586273
Following gene: 188586271
Centisome position: 54.81
GC content: 32.34
Gene sequence:
>1110_bases ATGAAAATAACTTTTCCCCATATGGGCAGCTTATTTTTACCTATGATGTCATTATTTAAGAGTTTAGGCTTTGAAGTTAT ACCTCCACCACCCATTACTCAAAAAACAATAGAATTAGGTTCAAAGTATTCTCCAGAATTTGCTTGTTTCCCTTTGAAAA TTAATGTAGGAAACTTTATTGAAGCTTTTGAGCAAGGTGCCGATACTATTGCCATGTTAGGTGGTGTAGGTCCTTGTAGA TTCGGATATTACGCAGTAGTTGAAAAGCAAATTCTAGAAAGCCTGAACTACAATTTTGATATAATAGTGGTAGACCCACC TGCTGCCGGAAATTTTAACAAAACAATTAAAGATTTAGGCAAACTACGTAATAATAATGACTGGAAAACTATTATACATG CTTTACGAACAACCTTCCATAAAATAAAAATTTTAGATGATCTTAATAAATTGTTAAACTATGTTAGACCGAGAACCAAT ATGCATAAAGATGTGGATTACCTTGAAAATCAATTTAAAGAAAAAATTGTAGATTTTCAAAATGTATCAGCGTTAAATGA GGGGTATCAAACAACTAGAACAGAATTATTAAAGCTAGTTAATAAGGACAATAATCCAGTAAAAGTTGCTTTAGTAGGGG AAATTTTTATGATCATTGAAAATACAGCCAATATGGAAATTGAAAAGGTTTTAGGGCAATATGGTGTAGAAGTAGAAAGA GGAATTTATCTCAGCGATTGGATTAGAGATAATATTATATTAGGTCCTTTTGGTTTAAACAGGAGTAATTCAGTTATTAA GGAGGCTAGACCATATATAAAAAGATTTGTTGGTGGCCATGGTCAGGAATCCATTGGTGAAGCTGTTTTAAAAGCTAAAG AAGGTTGCAGTGGAATAGTTCACTTATTTCCGTTTACATGTACACCTGAAATCATAGCTCAAGGAATTATGAATAAGGTT TCCCATGACTATGATATTCCTGTGTTAACAGTAATTTTAGATGAACATAAAGGTTTTGCAGGATTAAATACAAGATTGGA AGCATTTTGCGATTTACTGATAAACCAAAACAACACAAATCAAAAATCAAAAGTCGAGCAACCCCTTTAG
Upstream 100 bases:
>100_bases CCTTATTGATACTCACTTTAGATGAACACACGGGAAAATCAGGAGTTATTACACGTTTAGAAGCTTTTATCGATATGCTG AGAAGGAGGAAACAAGCTAT
Downstream 100 bases:
>100_bases AGCTACTGTTTAAAGGGGTTGCTTTTCTTTTGTTCCCTGTATAACTGTGATATAATGTAACGAGTAAATAAAAGGGGGGG CTGATCCGGACATGAAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKITFPHMGSLFLPMMSLFKSLGFEVIPPPPITQKTIELGSKYSPEFACFPLKINVGNFIEAFEQGADTIAMLGGVGPCR FGYYAVVEKQILESLNYNFDIIVVDPPAAGNFNKTIKDLGKLRNNNDWKTIIHALRTTFHKIKILDDLNKLLNYVRPRTN MHKDVDYLENQFKEKIVDFQNVSALNEGYQTTRTELLKLVNKDNNPVKVALVGEIFMIIENTANMEIEKVLGQYGVEVER GIYLSDWIRDNIILGPFGLNRSNSVIKEARPYIKRFVGGHGQESIGEAVLKAKEGCSGIVHLFPFTCTPEIIAQGIMNKV SHDYDIPVLTVILDEHKGFAGLNTRLEAFCDLLINQNNTNQKSKVEQPL
Sequences:
>Translated_369_residues MKITFPHMGSLFLPMMSLFKSLGFEVIPPPPITQKTIELGSKYSPEFACFPLKINVGNFIEAFEQGADTIAMLGGVGPCR FGYYAVVEKQILESLNYNFDIIVVDPPAAGNFNKTIKDLGKLRNNNDWKTIIHALRTTFHKIKILDDLNKLLNYVRPRTN MHKDVDYLENQFKEKIVDFQNVSALNEGYQTTRTELLKLVNKDNNPVKVALVGEIFMIIENTANMEIEKVLGQYGVEVER GIYLSDWIRDNIILGPFGLNRSNSVIKEARPYIKRFVGGHGQESIGEAVLKAKEGCSGIVHLFPFTCTPEIIAQGIMNKV SHDYDIPVLTVILDEHKGFAGLNTRLEAFCDLLINQNNTNQKSKVEQPL >Mature_369_residues MKITFPHMGSLFLPMMSLFKSLGFEVIPPPPITQKTIELGSKYSPEFACFPLKINVGNFIEAFEQGADTIAMLGGVGPCR FGYYAVVEKQILESLNYNFDIIVVDPPAAGNFNKTIKDLGKLRNNNDWKTIIHALRTTFHKIKILDDLNKLLNYVRPRTN MHKDVDYLENQFKEKIVDFQNVSALNEGYQTTRTELLKLVNKDNNPVKVALVGEIFMIIENTANMEIEKVLGQYGVEVER GIYLSDWIRDNIILGPFGLNRSNSVIKEARPYIKRFVGGHGQESIGEAVLKAKEGCSGIVHLFPFTCTPEIIAQGIMNKV SHDYDIPVLTVILDEHKGFAGLNTRLEAFCDLLINQNNTNQKSKVEQPL
Specific function: Unknown
COG id: COG3581
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41583; Mature: 41583
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITFPHMGSLFLPMMSLFKSLGFEVIPPPPITQKTIELGSKYSPEFACFPLKINVGNFI CEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHCCCCCCCEEEEEEEECHHHHH EAFEQGADTIAMLGGVGPCRFGYYAVVEKQILESLNYNFDIIVVDPPAAGNFNKTIKDLG HHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH KLRNNNDWKTIIHALRTTFHKIKILDDLNKLLNYVRPRTNMHKDVDYLENQFKEKIVDFQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH NVSALNEGYQTTRTELLKLVNKDNNPVKVALVGEIFMIIENTANMEIEKVLGQYGVEVER HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCHHC GIYLSDWIRDNIILGPFGLNRSNSVIKEARPYIKRFVGGHGQESIGEAVLKAKEGCSGIV CEEHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE HLFPFTCTPEIIAQGIMNKVSHDYDIPVLTVILDEHKGFAGLNTRLEAFCDLLINQNNTN EECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC QKSKVEQPL CHHHCCCCC >Mature Secondary Structure MKITFPHMGSLFLPMMSLFKSLGFEVIPPPPITQKTIELGSKYSPEFACFPLKINVGNFI CEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHCCCCCCCEEEEEEEECHHHHH EAFEQGADTIAMLGGVGPCRFGYYAVVEKQILESLNYNFDIIVVDPPAAGNFNKTIKDLG HHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH KLRNNNDWKTIIHALRTTFHKIKILDDLNKLLNYVRPRTNMHKDVDYLENQFKEKIVDFQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH NVSALNEGYQTTRTELLKLVNKDNNPVKVALVGEIFMIIENTANMEIEKVLGQYGVEVER HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCHHC GIYLSDWIRDNIILGPFGLNRSNSVIKEARPYIKRFVGGHGQESIGEAVLKAKEGCSGIV CEEHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE HLFPFTCTPEIIAQGIMNKVSHDYDIPVLTVILDEHKGFAGLNTRLEAFCDLLINQNNTN EECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC QKSKVEQPL CHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA