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The map label for this gene is yphB [H]

Identifier: 188586251

GI number: 188586251

Start: 1713978

End: 1714889

Strand: Reverse

Name: yphB [H]

Synonym: Nther_1634

Alternate gene names: 188586251

Gene position: 1714889-1713978 (Counterclockwise)

Preceding gene: 188586252

Following gene: 188586250

Centisome position: 54.17

GC content: 36.95

Gene sequence:

>912_bases
ATGATTCCTGAAATAGAAATACAACTCCAAGCAATAGCATTAGGTACAGTTATCGGTACAGGGGCTCGTTACATATTACT
AAGATCGGACTTTCGCATATATCCATCCTATCCCCATGGTAATGTCATTCATTTATCACTAGGATTCGTTGCAGCCTTTT
TAGGAGCAGTAGCTATTCCTGCACTTTTGGAAGAAGAATACACAGCAGTAACCTTTTTGGCTCTAGCAGCTCAACAGTTC
AGAGAAATAAGAAATATGGAAAGAGAAACTCTAACTAACTTAGAAAGTACAGAATTAGTTCCAAGAGGAAATCAATATAT
AGAAGGAATTTCTAAAGTTTTTGAAGCCAGGAATTATCTGGTTATGGCTGCTGCCTTGTTAACTAGTACTGCTACTTATT
TGACAGTAAGCTCCTTAATTGGCGGGATTATAGGAGTTTCTGCTACTTTGGCCACATTCAGAATTATGAGAGGTAAAAAA
GTTGGAGATTTTGCTGATATTCAATTAGGAGAGCTATCTTTTGACGATTCACTACTATTTGTTGAAGATATTCCAATGGT
TAATTACGGTGATTCTCAGGTTCAAGAAACCATTTTAAATAAAGGATTTGGCTTAATCATAACACCTAAGAACGACAATG
CCGGTGCTACACTTACCAATACTGGTCAAAGAATGGCAATTGTTCATGATGTGGCTTCAATGCTAGGAGTCTATAAAGAT
GTAAATACCGAAGAGTTTACTCCTGTTATCCGGAGAGATCTAGATACTGGGAGATTAGCTATGGTTATCATCCCACTAGA
GGGAAATCCTGATTATTTAATTGAAGCAGTTAAATATGTTCCAATATTAGAAAGTGCTCTACGCTATCCTTTGAAATCAA
GACCTGGTTATAAGGCAGGGAATGACAAATGA

Upstream 100 bases:

>100_bases
TTTAAAACCAAGAATAAGAATGAAAGCAACAGCGATCAAAAAACTGATGCCAAGGATAAGGACCATAACTCACAAAATTT
AGATGACCGGGTTGAGGATG

Downstream 100 bases:

>100_bases
GAGAAAACATTATTGTTGCTTTAGTGACTATATACCCGGAAAAAGTTTCTAGTGGAACCATTCCGATTTTCTATGAAAAT
TCTAAAGAGGATGCTGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIPEIEIQLQAIALGTVIGTGARYILLRSDFRIYPSYPHGNVIHLSLGFVAAFLGAVAIPALLEEEYTAVTFLALAAQQF
REIRNMERETLTNLESTELVPRGNQYIEGISKVFEARNYLVMAAALLTSTATYLTVSSLIGGIIGVSATLATFRIMRGKK
VGDFADIQLGELSFDDSLLFVEDIPMVNYGDSQVQETILNKGFGLIITPKNDNAGATLTNTGQRMAIVHDVASMLGVYKD
VNTEEFTPVIRRDLDTGRLAMVIIPLEGNPDYLIEAVKYVPILESALRYPLKSRPGYKAGNDK

Sequences:

>Translated_303_residues
MIPEIEIQLQAIALGTVIGTGARYILLRSDFRIYPSYPHGNVIHLSLGFVAAFLGAVAIPALLEEEYTAVTFLALAAQQF
REIRNMERETLTNLESTELVPRGNQYIEGISKVFEARNYLVMAAALLTSTATYLTVSSLIGGIIGVSATLATFRIMRGKK
VGDFADIQLGELSFDDSLLFVEDIPMVNYGDSQVQETILNKGFGLIITPKNDNAGATLTNTGQRMAIVHDVASMLGVYKD
VNTEEFTPVIRRDLDTGRLAMVIIPLEGNPDYLIEAVKYVPILESALRYPLKSRPGYKAGNDK
>Mature_303_residues
MIPEIEIQLQAIALGTVIGTGARYILLRSDFRIYPSYPHGNVIHLSLGFVAAFLGAVAIPALLEEEYTAVTFLALAAQQF
REIRNMERETLTNLESTELVPRGNQYIEGISKVFEARNYLVMAAALLTSTATYLTVSSLIGGIIGVSATLATFRIMRGKK
VGDFADIQLGELSFDDSLLFVEDIPMVNYGDSQVQETILNKGFGLIITPKNDNAGATLTNTGQRMAIVHDVASMLGVYKD
VNTEEFTPVIRRDLDTGRLAMVIIPLEGNPDYLIEAVKYVPILESALRYPLKSRPGYKAGNDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33226; Mature: 33226

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPEIEIQLQAIALGTVIGTGARYILLRSDFRIYPSYPHGNVIHLSLGFVAAFLGAVAIP
CCCCEEEEEEEEEEEHHHCCCCEEEEEECCCEEECCCCCCCEEEEHHHHHHHHHHHHHHH
ALLEEEYTAVTFLALAAQQFREIRNMERETLTNLESTELVPRGNQYIEGISKVFEARNYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHH
VMAAALLTSTATYLTVSSLIGGIIGVSATLATFRIMRGKKVGDFADIQLGELSFDDSLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEE
VEDIPMVNYGDSQVQETILNKGFGLIITPKNDNAGATLTNTGQRMAIVHDVASMLGVYKD
EECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC
VNTEEFTPVIRRDLDTGRLAMVIIPLEGNPDYLIEAVKYVPILESALRYPLKSRPGYKAG
CCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NDK
CCC
>Mature Secondary Structure
MIPEIEIQLQAIALGTVIGTGARYILLRSDFRIYPSYPHGNVIHLSLGFVAAFLGAVAIP
CCCCEEEEEEEEEEEHHHCCCCEEEEEECCCEEECCCCCCCEEEEHHHHHHHHHHHHHHH
ALLEEEYTAVTFLALAAQQFREIRNMERETLTNLESTELVPRGNQYIEGISKVFEARNYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHH
VMAAALLTSTATYLTVSSLIGGIIGVSATLATFRIMRGKKVGDFADIQLGELSFDDSLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEE
VEDIPMVNYGDSQVQETILNKGFGLIITPKNDNAGATLTNTGQRMAIVHDVASMLGVYKD
EECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC
VNTEEFTPVIRRDLDTGRLAMVIIPLEGNPDYLIEAVKYVPILESALRYPLKSRPGYKAG
CCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NDK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]