| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586241
Identifier: 188586241
GI number: 188586241
Start: 1703293
End: 1704774
Strand: Reverse
Name: 188586241
Synonym: Nther_1624
Alternate gene names: NA
Gene position: 1704774-1703293 (Counterclockwise)
Preceding gene: 188586242
Following gene: 188586240
Centisome position: 53.85
GC content: 31.38
Gene sequence:
>1482_bases ATGAAAATTAATGAAAATAGATTGCCATATCTATTGTTGCAAGACTCACAAAAATATATTGCTAAACTTAGTCAGCAACA ACTTCTTTTGAAATCATCTGATAACTCTGAAGTATCACTAACAGATTCTGTGGATGAATTTTTAATTTGTCCAAGAGATA ATTATTTTAACTTTTTAATATTGAAAGAAGATAAAGTATGGAATGGGGAACTGCAAGACTTAACAAATCCCCAAACTTCA TTACAATTTACACCACTATTTCAAAAAGGTTATGAAAATTTAAGTTTAGGGACATTTGTTTCGAATTCTAAACACTCTCC CGCAAATACTTTGCTTTTTTGTACTTCCAAAGATCAGGATACAACCAAACTGCTCTACTGGGAAAAAAAAGATAAATGGA CCGGTCCAATAAACATTGCTAGTGGGCAGGATATTATTCTAACTAATTCATCGTGTCAGATAGATGAAAAGGGTAATGCT CATTTAGTATATGTAATAAAAAACGGTCATCAAGAATTACTACTACAGCGGCAATTGTCACAAAATCGTAAATGGAGTAA TCCAATTGTGATTACTCAAAATAATGTCAGTGAAAGTTTACACGAACCTGTTCTACTTAATTATGATAATAAGTTAATTA CCTTTTGGATTGGAGATAGGGGAGCGAAGAAACAACTATACTATACTGAAACAAGTAAAGATAATTACTTCAACTGGAAT GAGCCTAATTGTATCAAACAGGTGCAGGGTAACAATACTCTTGTCTATTTAACCCCAGGATGCTCAAATAAAGAACTATG GGTAGTTTACAAGACCAGTACTTACAGAGAAGGATATATCAAAAAAGCAAGTGATGGTGAATGGCAACAAATTAATATTC CTAAAAATCTTAAAGAAATAAGAAGTTGCCAGCTTATTGAAAATAATTGCAGTCAGAGAGCTTTAGCAAATCTATATGAA GATGAATTATGGAAACCGGGAATGGAAAATGGATATAACTCCCAAGAGAGGGATAGTAATTATCAACCGAAACAAAAAAA ATTATCCCAGTCTTCTTTAAATTTTGCTCGAAACAAAAAAGATGTTCAACATTCGGAAAAGAATAATTATAATACTAAGA CTAGACAAAGCAAAACAAGCTGGTATGGAGGGCCCTCTCCAAAAAACCCTAGAAAAATGCTCACTGAAACTCTTAAATCT AAAGGGTATTCAAAACAGATTTCAAACATGGAAAAAACCAACAGACCGAACAGTCAAACTCCAAATAAAGAATTAAAAAA ACTCTCTAAGCAATTACATTCTCTACAAAAAGAAAAGCAAATTCTGGCAGATAATTATGATAAGTTAAATCAAAAACTTG AGACTATAGAAGCTGAAAAAGAAGAGTTAATTAACAAAATTAACGGACTAGAAGAACAGTTGAATAATATACAAGAAGAA AATAATAATAAAAAATCTCTTTGGAGCAAATTGTTTAGATGA
Upstream 100 bases:
>100_bases AAAGGTCGGTAAATCGATTTAATATGATATTCATTTGATAATAACTTTTTTTATTATGCATAAGTATTATAAAAAGACTA ATTGTACAAGGAGGATTTTA
Downstream 100 bases:
>100_bases CCTAAATTAACCATATTTTGTTCATAAATAACATAAATCAACATTACTAGGTCTAAAGGACAATATTACTATTCCTCCTA CACAATTTTCAATAAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MKINENRLPYLLLQDSQKYIAKLSQQQLLLKSSDNSEVSLTDSVDEFLICPRDNYFNFLILKEDKVWNGELQDLTNPQTS LQFTPLFQKGYENLSLGTFVSNSKHSPANTLLFCTSKDQDTTKLLYWEKKDKWTGPINIASGQDIILTNSSCQIDEKGNA HLVYVIKNGHQELLLQRQLSQNRKWSNPIVITQNNVSESLHEPVLLNYDNKLITFWIGDRGAKKQLYYTETSKDNYFNWN EPNCIKQVQGNNTLVYLTPGCSNKELWVVYKTSTYREGYIKKASDGEWQQINIPKNLKEIRSCQLIENNCSQRALANLYE DELWKPGMENGYNSQERDSNYQPKQKKLSQSSLNFARNKKDVQHSEKNNYNTKTRQSKTSWYGGPSPKNPRKMLTETLKS KGYSKQISNMEKTNRPNSQTPNKELKKLSKQLHSLQKEKQILADNYDKLNQKLETIEAEKEELINKINGLEEQLNNIQEE NNNKKSLWSKLFR
Sequences:
>Translated_493_residues MKINENRLPYLLLQDSQKYIAKLSQQQLLLKSSDNSEVSLTDSVDEFLICPRDNYFNFLILKEDKVWNGELQDLTNPQTS LQFTPLFQKGYENLSLGTFVSNSKHSPANTLLFCTSKDQDTTKLLYWEKKDKWTGPINIASGQDIILTNSSCQIDEKGNA HLVYVIKNGHQELLLQRQLSQNRKWSNPIVITQNNVSESLHEPVLLNYDNKLITFWIGDRGAKKQLYYTETSKDNYFNWN EPNCIKQVQGNNTLVYLTPGCSNKELWVVYKTSTYREGYIKKASDGEWQQINIPKNLKEIRSCQLIENNCSQRALANLYE DELWKPGMENGYNSQERDSNYQPKQKKLSQSSLNFARNKKDVQHSEKNNYNTKTRQSKTSWYGGPSPKNPRKMLTETLKS KGYSKQISNMEKTNRPNSQTPNKELKKLSKQLHSLQKEKQILADNYDKLNQKLETIEAEKEELINKINGLEEQLNNIQEE NNNKKSLWSKLFR >Mature_493_residues MKINENRLPYLLLQDSQKYIAKLSQQQLLLKSSDNSEVSLTDSVDEFLICPRDNYFNFLILKEDKVWNGELQDLTNPQTS LQFTPLFQKGYENLSLGTFVSNSKHSPANTLLFCTSKDQDTTKLLYWEKKDKWTGPINIASGQDIILTNSSCQIDEKGNA HLVYVIKNGHQELLLQRQLSQNRKWSNPIVITQNNVSESLHEPVLLNYDNKLITFWIGDRGAKKQLYYTETSKDNYFNWN EPNCIKQVQGNNTLVYLTPGCSNKELWVVYKTSTYREGYIKKASDGEWQQINIPKNLKEIRSCQLIENNCSQRALANLYE DELWKPGMENGYNSQERDSNYQPKQKKLSQSSLNFARNKKDVQHSEKNNYNTKTRQSKTSWYGGPSPKNPRKMLTETLKS KGYSKQISNMEKTNRPNSQTPNKELKKLSKQLHSLQKEKQILADNYDKLNQKLETIEAEKEELINKINGLEEQLNNIQEE NNNKKSLWSKLFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57382; Mature: 57382
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINENRLPYLLLQDSQKYIAKLSQQQLLLKSSDNSEVSLTDSVDEFLICPRDNYFNFLI CCCCCCCCCEEEECCCHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEECCCCCCEEEEE LKEDKVWNGELQDLTNPQTSLQFTPLFQKGYENLSLGTFVSNSKHSPANTLLFCTSKDQD EECCCCCCCCHHHCCCCCCCEEECHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCC TTKLLYWEKKDKWTGPINIASGQDIILTNSSCQIDEKGNAHLVYVIKNGHQELLLQRQLS CEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHH QNRKWSNPIVITQNNVSESLHEPVLLNYDNKLITFWIGDRGAKKQLYYTETSKDNYFNWN HCCCCCCCEEEECCCHHHHHCCCEEEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC EPNCIKQVQGNNTLVYLTPGCSNKELWVVYKTSTYREGYIKKASDGEWQQINIPKNLKEI CCHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEECCCCCCEEEECCCHHHHHH RSCQLIENNCSQRALANLYEDELWKPGMENGYNSQERDSNYQPKQKKLSQSSLNFARNKK HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHH DVQHSEKNNYNTKTRQSKTSWYGGPSPKNPRKMLTETLKSKGYSKQISNMEKTNRPNSQT HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC PNKELKKLSKQLHSLQKEKQILADNYDKLNQKLETIEAEKEELINKINGLEEQLNNIQEE CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNNKKSLWSKLFR CCCHHHHHHHHCC >Mature Secondary Structure MKINENRLPYLLLQDSQKYIAKLSQQQLLLKSSDNSEVSLTDSVDEFLICPRDNYFNFLI CCCCCCCCCEEEECCCHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEECCCCCCEEEEE LKEDKVWNGELQDLTNPQTSLQFTPLFQKGYENLSLGTFVSNSKHSPANTLLFCTSKDQD EECCCCCCCCHHHCCCCCCCEEECHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCC TTKLLYWEKKDKWTGPINIASGQDIILTNSSCQIDEKGNAHLVYVIKNGHQELLLQRQLS CEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHH QNRKWSNPIVITQNNVSESLHEPVLLNYDNKLITFWIGDRGAKKQLYYTETSKDNYFNWN HCCCCCCCEEEECCCHHHHHCCCEEEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC EPNCIKQVQGNNTLVYLTPGCSNKELWVVYKTSTYREGYIKKASDGEWQQINIPKNLKEI CCHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEECCCCCCEEEECCCHHHHHH RSCQLIENNCSQRALANLYEDELWKPGMENGYNSQERDSNYQPKQKKLSQSSLNFARNKK HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHH DVQHSEKNNYNTKTRQSKTSWYGGPSPKNPRKMLTETLKSKGYSKQISNMEKTNRPNSQT HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC PNKELKKLSKQLHSLQKEKQILADNYDKLNQKLETIEAEKEELINKINGLEEQLNNIQEE CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNNKKSLWSKLFR CCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA