| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586230
Identifier: 188586230
GI number: 188586230
Start: 1692015
End: 1692782
Strand: Reverse
Name: 188586230
Synonym: Nther_1613
Alternate gene names: NA
Gene position: 1692782-1692015 (Counterclockwise)
Preceding gene: 188586231
Following gene: 188586229
Centisome position: 53.48
GC content: 35.94
Gene sequence:
>768_bases TTGAAATTACGAAAATTAATATTGACTGCACTGTCGTTAATCATTCTAGTAACCTTTGCAGCATGTGGAGAAGAAGCACC TAAAGATGAAGCAGAGCCTAAGGAATCTCAAGATGTAGAAGGAGAAATAGAACAGGATGTAGTAGCCGTTGTTAATGGAG AAGAAATTATGTACGAAGAACTTAGCCAAACCAAAGAACAGTTGGCATTTCAAATGCAAATGCCCATTGATCAGCTAGAA GAACAAGACGATGAAATGATGAATGAACTTCGTGATATGGCTATGGAAGAACTTATTGGAGGAACTCTTCTAGCACAAGA AGCTGAAGCAGAAGGTTTAACGCCAGATGAAGAAGAAGTTGAAAAGAACCTTGAACAATATACTGCTCAATTTGGCGAAA GTGAAGAAGAGATTGAAGAAAACTTAGCCCAAGAAGATTTAACAATGGAAGATTTAAGAGAAGATGTAACACAATCTTTA ATGATCACAGAAATCATGGATGAGAAGATAGAAGTTGATGAAGATGTAGATGTATCCGAAGAAGAAGTTCGAGAAGTATA TCAACAACAACAAGCTCAAATGCAGATGATGATGGGAGAAAAAGAAGAAGATGCCGACTTACCAGACTTCGAAGATTTAG AAGAAGAAGAACGTCAAGAGATGGAAGAAATGGCTGAACAACAAAAAATACAACAACTAGAACACGAAAAATTAATGGAA TACATTGACGAATTAAGAGAAGAAGGAGAAGTTGAAGTTAAAATATAA
Upstream 100 bases:
>100_bases ATCTCGACTACTAATTAAGGGAGGGTTGAAGTCAGCATTTTATATAAGTAACTTGATTTCTACAACAACTATTTTAAATA ATATTATGGGAGGTATTTTT
Downstream 100 bases:
>100_bases TAAAAGAGAACTGAATACGATTAACTTAGAAGAGTTCTATAAGATCGTAAGATTGTAAAAAGCCAGCCTGATCCAGGTTG GCTTTTTTTTATTAACCCCA
Product: SurA domain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKLRKLILTALSLIILVTFAACGEEAPKDEAEPKESQDVEGEIEQDVVAVVNGEEIMYEELSQTKEQLAFQMQMPIDQLE EQDDEMMNELRDMAMEELIGGTLLAQEAEAEGLTPDEEEVEKNLEQYTAQFGESEEEIEENLAQEDLTMEDLREDVTQSL MITEIMDEKIEVDEDVDVSEEEVREVYQQQQAQMQMMMGEKEEDADLPDFEDLEEEERQEMEEMAEQQKIQQLEHEKLME YIDELREEGEVEVKI
Sequences:
>Translated_255_residues MKLRKLILTALSLIILVTFAACGEEAPKDEAEPKESQDVEGEIEQDVVAVVNGEEIMYEELSQTKEQLAFQMQMPIDQLE EQDDEMMNELRDMAMEELIGGTLLAQEAEAEGLTPDEEEVEKNLEQYTAQFGESEEEIEENLAQEDLTMEDLREDVTQSL MITEIMDEKIEVDEDVDVSEEEVREVYQQQQAQMQMMMGEKEEDADLPDFEDLEEEERQEMEEMAEQQKIQQLEHEKLME YIDELREEGEVEVKI >Mature_255_residues MKLRKLILTALSLIILVTFAACGEEAPKDEAEPKESQDVEGEIEQDVVAVVNGEEIMYEELSQTKEQLAFQMQMPIDQLE EQDDEMMNELRDMAMEELIGGTLLAQEAEAEGLTPDEEEVEKNLEQYTAQFGESEEEIEENLAQEDLTMEDLREDVTQSL MITEIMDEKIEVDEDVDVSEEEVREVYQQQQAQMQMMMGEKEEDADLPDFEDLEEEERQEMEEMAEQQKIQQLEHEKLME YIDELREEGEVEVKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29661; Mature: 29661
Theoretical pI: Translated: 3.50; Mature: 3.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRKLILTALSLIILVTFAACGEEAPKDEAEPKESQDVEGEIEQDVVAVVNGEEIMYEE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH LSQTKEQLAFQMQMPIDQLEEQDDEMMNELRDMAMEELIGGTLLAQEAEAEGLTPDEEEV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH EKNLEQYTAQFGESEEEIEENLAQEDLTMEDLREDVTQSLMITEIMDEKIEVDEDVDVSE HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EEVREVYQQQQAQMQMMMGEKEEDADLPDFEDLEEEERQEMEEMAEQQKIQQLEHEKLME HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIDELREEGEVEVKI HHHHHHHCCCCEECC >Mature Secondary Structure MKLRKLILTALSLIILVTFAACGEEAPKDEAEPKESQDVEGEIEQDVVAVVNGEEIMYEE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH LSQTKEQLAFQMQMPIDQLEEQDDEMMNELRDMAMEELIGGTLLAQEAEAEGLTPDEEEV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH EKNLEQYTAQFGESEEEIEENLAQEDLTMEDLREDVTQSLMITEIMDEKIEVDEDVDVSE HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EEVREVYQQQQAQMQMMMGEKEEDADLPDFEDLEEEERQEMEEMAEQQKIQQLEHEKLME HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIDELREEGEVEVKI HHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA