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The map label for this gene is 188586218

Identifier: 188586218

GI number: 188586218

Start: 1677674

End: 1678741

Strand: Reverse

Name: 188586218

Synonym: Nther_1601

Alternate gene names: NA

Gene position: 1678741-1677674 (Counterclockwise)

Preceding gene: 188586221

Following gene: 188586217

Centisome position: 53.03

GC content: 31.55

Gene sequence:

>1068_bases
TTGTTTGAATTTGAACATGAGTTTGAAAAGATTTTCGATGAGTTATCAAAAATAGAAGAGCATATAGAACAGGATCCCGA
GAAAAAGGATGATAATGATATTACTGAGCGGTTGTTAAAATTAAGAAGAGAAATAGATAAGTGTATAGGGTACTGGTTAC
AATTTGAAGAAAAACTTTGGTATCTACAAGACGAATACGGGATTGATATTCCTGATCAACTGGATGATAGTTTGATTTCA
GCATATTTAGGTATTTCTAATGAAGAGGTTTCTAACTTAGAGTTATTAAATTCCTTTTCTAAAAGTACCGAAGAATATGA
TGAGGAACTGGTTGATAAATTGTCAAGTATGAAAGAGGCTTATAGAAATAAAGACCACGAGAAAAATCATTCCAATGAAG
TTAATTCTGAGCAAAATAAAGATAATAAAAGTATTCATTCTTTTAGAAAAGGTCTTGGTTATTTTAATTTAGCCATGTTA
GAAGAGGCCAAAAACGAATTTGAACAAGTAGTATCCGAAGAACCAAATATGATTATGGGTCATTATTTCTTAGGATTAGC
GTATTTTTATAAGAGTGAATATGATAAAGCCTTAAAAAAATTTCGCCTAGTTGTTGAATTGGTAGAGGATGAGGAAATCC
TAGCATTAGCCTATAACGCCATAGGTAACATATATGTGGATAAAGAAGAACAAGAGAAAGCACTTACTAATTACCTTAGG
GCATGTGACTATACTGAGAGTTTTCCGGATATCTATTTTAATTGTGGTGCTATTTATTTTAATCTTGGAGACTTTCTTCA
AAGTGTAAAATACTTTCAAAAAGCTTTACAGATAACGTCAAATAATAGCGATTGGGAACTTCACTTATATATAGGAAAAG
CATACACCTACTTAGGGGATCTAGATAAAGCATTAAAACATCTTAAAAAGGCTTTAAGAATAGAACCCAAAAATGAAGAA
ATTCACTTTGAATTAGGTCTCATTTATCAACTCAAACAGGAGCAATATCTAGCCGCAAAAGAGTACGAAAGGGCAAAACA
ACTATCCCAGAAAAAATCTGAGCAATAA

Upstream 100 bases:

>100_bases
AGTATTAATTGTTCTTTGATTTATCACGATTATATAAGATTTAAAGAGTAAAATCAATTAAGAAGTATGTAGTATATATT
GACAAATAGGGGGATTAGGA

Downstream 100 bases:

>100_bases
ATTTTTAAAGAAAAGTTATTAAAGTCAAAGCACATTTCAAAAATATTATAGAACAAAGATATACAGGGGTGTGATAAGTT
GTTATTAATAACGTCAGGGA

Product: Tetratricopeptide TPR_2 repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MFEFEHEFEKIFDELSKIEEHIEQDPEKKDDNDITERLLKLRREIDKCIGYWLQFEEKLWYLQDEYGIDIPDQLDDSLIS
AYLGISNEEVSNLELLNSFSKSTEEYDEELVDKLSSMKEAYRNKDHEKNHSNEVNSEQNKDNKSIHSFRKGLGYFNLAML
EEAKNEFEQVVSEEPNMIMGHYFLGLAYFYKSEYDKALKKFRLVVELVEDEEILALAYNAIGNIYVDKEEQEKALTNYLR
ACDYTESFPDIYFNCGAIYFNLGDFLQSVKYFQKALQITSNNSDWELHLYIGKAYTYLGDLDKALKHLKKALRIEPKNEE
IHFELGLIYQLKQEQYLAAKEYERAKQLSQKKSEQ

Sequences:

>Translated_355_residues
MFEFEHEFEKIFDELSKIEEHIEQDPEKKDDNDITERLLKLRREIDKCIGYWLQFEEKLWYLQDEYGIDIPDQLDDSLIS
AYLGISNEEVSNLELLNSFSKSTEEYDEELVDKLSSMKEAYRNKDHEKNHSNEVNSEQNKDNKSIHSFRKGLGYFNLAML
EEAKNEFEQVVSEEPNMIMGHYFLGLAYFYKSEYDKALKKFRLVVELVEDEEILALAYNAIGNIYVDKEEQEKALTNYLR
ACDYTESFPDIYFNCGAIYFNLGDFLQSVKYFQKALQITSNNSDWELHLYIGKAYTYLGDLDKALKHLKKALRIEPKNEE
IHFELGLIYQLKQEQYLAAKEYERAKQLSQKKSEQ
>Mature_355_residues
MFEFEHEFEKIFDELSKIEEHIEQDPEKKDDNDITERLLKLRREIDKCIGYWLQFEEKLWYLQDEYGIDIPDQLDDSLIS
AYLGISNEEVSNLELLNSFSKSTEEYDEELVDKLSSMKEAYRNKDHEKNHSNEVNSEQNKDNKSIHSFRKGLGYFNLAML
EEAKNEFEQVVSEEPNMIMGHYFLGLAYFYKSEYDKALKKFRLVVELVEDEEILALAYNAIGNIYVDKEEQEKALTNYLR
ACDYTESFPDIYFNCGAIYFNLGDFLQSVKYFQKALQITSNNSDWELHLYIGKAYTYLGDLDKALKHLKKALRIEPKNEE
IHFELGLIYQLKQEQYLAAKEYERAKQLSQKKSEQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42103; Mature: 42103

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEFEHEFEKIFDELSKIEEHIEQDPEKKDDNDITERLLKLRREIDKCIGYWLQFEEKLW
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLQDEYGIDIPDQLDDSLISAYLGISNEEVSNLELLNSFSKSTEEYDEELVDKLSSMKEA
HCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRNKDHEKNHSNEVNSEQNKDNKSIHSFRKGLGYFNLAMLEEAKNEFEQVVSEEPNMIMG
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEHH
HYFLGLAYFYKSEYDKALKKFRLVVELVEDEEILALAYNAIGNIYVDKEEQEKALTNYLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHH
ACDYTESFPDIYFNCGAIYFNLGDFLQSVKYFQKALQITSNNSDWELHLYIGKAYTYLGD
HCCCCCCCCCHHEECHHHEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHH
LDKALKHLKKALRIEPKNEEIHFELGLIYQLKQEQYLAAKEYERAKQLSQKKSEQ
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFEFEHEFEKIFDELSKIEEHIEQDPEKKDDNDITERLLKLRREIDKCIGYWLQFEEKLW
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLQDEYGIDIPDQLDDSLISAYLGISNEEVSNLELLNSFSKSTEEYDEELVDKLSSMKEA
HCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRNKDHEKNHSNEVNSEQNKDNKSIHSFRKGLGYFNLAMLEEAKNEFEQVVSEEPNMIMG
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEHH
HYFLGLAYFYKSEYDKALKKFRLVVELVEDEEILALAYNAIGNIYVDKEEQEKALTNYLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHH
ACDYTESFPDIYFNCGAIYFNLGDFLQSVKYFQKALQITSNNSDWELHLYIGKAYTYLGD
HCCCCCCCCCHHEECHHHEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHH
LDKALKHLKKALRIEPKNEEIHFELGLIYQLKQEQYLAAKEYERAKQLSQKKSEQ
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA