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The map label for this gene is ycfF [C]

Identifier: 188585816

GI number: 188585816

Start: 1261420

End: 1261764

Strand: Direct

Name: ycfF [C]

Synonym: Nther_1190

Alternate gene names: 188585816

Gene position: 1261420-1261764 (Clockwise)

Preceding gene: 188585815

Following gene: 188585817

Centisome position: 39.85

GC content: 35.65

Gene sequence:

>345_bases
GTGTCGGACTGCATATTCTGCAAAATAGCCAATAAAGAGATGGATAGTGAAATAGTATATGAGGATGAAAATATTATTGC
ATTTAAAGATGTGAATCCTCAAGCACCAGTCCACTTGCTGATTATTCCCAAAAAGCATATTGAGTCAGTTATGGATTTTG
AAGATAAAGATTCAGAACTTATTTCAAAAATCTTTTTTGTAGCTCAAAAACTGGCTCAAGAGTTTGATGTTCATGAATCA
GGTTTTAGAATTGTAAATAATTGCGGGAAAGAAGGTGGACAGACTGTTAACCATGTTCACTTTCATTTGTTAGGCAAACG
CAGCTTGACCTGGCCACCAGGTTAA

Upstream 100 bases:

>100_bases
CAAAGCATATAAGAAATTTAATTTATTTATTGATGTAAATTTTGTTCATGCTAGTAAGTATACTTTTTGTAAGGTTAAGA
AGTAAGGGGGTGAACAGAGA

Downstream 100 bases:

>100_bases
AAAAGGATTATCATTTATTTTACTTACATATAAATAAATGATATGATATTAAATGTATAGAATTGTTTGTTGTGAAAGAG
GGGAGGGAAATACGTGGCTG

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSDCIFCKIANKEMDSEIVYEDENIIAFKDVNPQAPVHLLIIPKKHIESVMDFEDKDSELISKIFFVAQKLAQEFDVHES
GFRIVNNCGKEGGQTVNHVHFHLLGKRSLTWPPG

Sequences:

>Translated_114_residues
MSDCIFCKIANKEMDSEIVYEDENIIAFKDVNPQAPVHLLIIPKKHIESVMDFEDKDSELISKIFFVAQKLAQEFDVHES
GFRIVNNCGKEGGQTVNHVHFHLLGKRSLTWPPG
>Mature_113_residues
SDCIFCKIANKEMDSEIVYEDENIIAFKDVNPQAPVHLLIIPKKHIESVMDFEDKDSELISKIFFVAQKLAQEFDVHESG
FRIVNNCGKEGGQTVNHVHFHLLGKRSLTWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=113, Percent_Identity=46.0176991150442, Blast_Score=116, Evalue=3e-27,
Organism=Homo sapiens, GI14211923, Length=113, Percent_Identity=43.3628318584071, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1787346, Length=107, Percent_Identity=42.0560747663551, Blast_Score=92, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=45.1327433628319, Blast_Score=118, Evalue=7e-28,
Organism=Saccharomyces cerevisiae, GI6320078, Length=115, Percent_Identity=36.5217391304348, Blast_Score=70, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28574010, Length=112, Percent_Identity=44.6428571428571, Blast_Score=111, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24581222, Length=112, Percent_Identity=44.6428571428571, Blast_Score=111, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12998; Mature: 12867

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCIFCKIANKEMDSEIVYEDENIIAFKDVNPQAPVHLLIIPKKHIESVMDFEDKDSEL
CCCEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECHHHHHHHHCCCCCCHHH
ISKIFFVAQKLAQEFDVHESGFRIVNNCGKEGGQTVNHVHFHLLGKRSLTWPPG
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SDCIFCKIANKEMDSEIVYEDENIIAFKDVNPQAPVHLLIIPKKHIESVMDFEDKDSEL
CCEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECHHHHHHHHCCCCCCHHH
ISKIFFVAQKLAQEFDVHESGFRIVNNCGKEGGQTVNHVHFHLLGKRSLTWPPG
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]