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The map label for this gene is nirD [H]

Identifier: 188585755

GI number: 188585755

Start: 1197059

End: 1197529

Strand: Direct

Name: nirD [H]

Synonym: Nther_1129

Alternate gene names: 188585755

Gene position: 1197059-1197529 (Clockwise)

Preceding gene: 188585754

Following gene: 188585756

Centisome position: 37.82

GC content: 37.37

Gene sequence:

>471_bases
ATGACCAAGAATCAAGAACAGCTAGATGAACTTGATAAAAAGATACTAAACACTATCCAAAGAGGTTTTCCTATAGAAAA
ACGCCCATATAAAAAACTAGCCCAAGAAGTAAATAGCAATGAAGAGGAAGTGTTTCAGCGCGTCCAGGATATGCGAGAAA
GTGGATTTATCCGAAGACTTGGTGGTGTTTTTGATACAAAGAAATTAGGCTTTAAAACAACTCTGATCGCTTTGAAAGTT
GACCAGGCCAATATAGATGAAGTAGCAGGAAGGATCAATGAATATCAAGGTGTAACCCACAATTACAAGCGTGAGCACGA
TTTCAACTTGTGGTTTACTTTGGCTGCCTCAGGAGAAGATGAATTAGACAGACAATTAAAGGAGATTTCCCAGTTGCCTG
GTGTGAAAAGAATGTTAAAATTGCCTGCCCTTAAATTGTTTAAAATAGGGGTTAATTTCAAGATGGATTAA

Upstream 100 bases:

>100_bases
CCCTGGTGTTTATACAAGAATAACTAGCTAGAAATTGTCAGGAATAATTGTAAAAATAACTGTCAGGAATAACTTTATTA
AATATCTTGGGAGGAATATT

Downstream 100 bases:

>100_bases
AATATTATTCCATTGCTAAACTAGTAGAGGTGAATGTTATGAAAAAGACTCCAAACCTGAGTGATAATGATCAAATCAAT
TCCCAAGATCAAAACCCTAA

Product: putative transcriptional regulator, AsnC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTKNQEQLDELDKKILNTIQRGFPIEKRPYKKLAQEVNSNEEEVFQRVQDMRESGFIRRLGGVFDTKKLGFKTTLIALKV
DQANIDEVAGRINEYQGVTHNYKREHDFNLWFTLAASGEDELDRQLKEISQLPGVKRMLKLPALKLFKIGVNFKMD

Sequences:

>Translated_156_residues
MTKNQEQLDELDKKILNTIQRGFPIEKRPYKKLAQEVNSNEEEVFQRVQDMRESGFIRRLGGVFDTKKLGFKTTLIALKV
DQANIDEVAGRINEYQGVTHNYKREHDFNLWFTLAASGEDELDRQLKEISQLPGVKRMLKLPALKLFKIGVNFKMD
>Mature_155_residues
TKNQEQLDELDKKILNTIQRGFPIEKRPYKKLAQEVNSNEEEVFQRVQDMRESGFIRRLGGVFDTKKLGFKTTLIALKVD
QANIDEVAGRINEYQGVTHNYKREHDFNLWFTLAASGEDELDRQLKEISQLPGVKRMLKLPALKLFKIGVNFKMD

Specific function: Required for the biosynthesis of heme D1 of nitrite reductase [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18172; Mature: 18041

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNQEQLDELDKKILNTIQRGFPIEKRPYKKLAQEVNSNEEEVFQRVQDMRESGFIRRL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
GGVFDTKKLGFKTTLIALKVDQANIDEVAGRINEYQGVTHNYKREHDFNLWFTLAASGED
CCHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCH
ELDRQLKEISQLPGVKRMLKLPALKLFKIGVNFKMD
HHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCEECC
>Mature Secondary Structure 
TKNQEQLDELDKKILNTIQRGFPIEKRPYKKLAQEVNSNEEEVFQRVQDMRESGFIRRL
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
GGVFDTKKLGFKTTLIALKVDQANIDEVAGRINEYQGVTHNYKREHDFNLWFTLAASGED
CCHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCH
ELDRQLKEISQLPGVKRMLKLPALKLFKIGVNFKMD
HHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7588711 [H]